diff --git a/README.md b/README.md index 5bafe5bd..707c3e92 100644 --- a/README.md +++ b/README.md @@ -2,7 +2,7 @@ **[Documentation](https://github.com/KosinskiLab/AlphaPulldown/wiki)** | **[Precalculated Input Database](https://github.com/KosinskiLab/AlphaPulldown/wiki/Features-Database)** | **[Downstream Analysis](https://github.com/KosinskiLab/AlphaPulldown/wiki/Downstream-Analysis)** -AlphaPulldownSnakemake provides a convenient way to run AlphaPulldown using a Snakemake pipeline. This lets you focus entirely on **what** you want to compute, rather than **how** to manage dependencies, versioning, and cluster execution. When you deploy the workflow with `snakedeploy`, the configuration file will be copied after deployment to your local project directory as [config/config.yaml](https://github.com/KosinskiLab/AlphaPulldownSnakemake/blob/main/config/config.yaml). +[AlphaPulldownSnakemake](https://github.com/KosinskiLab/AlphaPulldownSnakemake) provides a convenient way to run AlphaPulldown using a Snakemake pipeline. This lets you focus entirely on **what** you want to compute, rather than **how** to manage dependencies, versioning, and cluster execution. When you deploy the workflow with `snakedeploy`, the configuration file will be copied after deployment to your local project directory as [config/config.yaml](https://github.com/KosinskiLab/AlphaPulldownSnakemake/blob/main/config/config.yaml). For running without Snakemake, see this [link](https://github.com/KosinskiLab/AlphaPulldown/wiki).