4 Commits

Author SHA1 Message Date
Dima Molodenskiy
56cda1430c Rm ccp4 2024-10-11 10:39:00 +02:00
Dima Molodenskiy
2b7c334bc2 Create hard-coded temp dir for pi_score 2024-09-25 09:57:05 +02:00
Dima
a7f6506a21 Fix: use relative path. Use image from kosinskilab 2024-08-05 13:24:27 +02:00
Dima
67b89f94f9 Snakemake docker (#317)
* Copied from https://github.com/maurerv/alphaabriss

* CI/CD

* Restructured snakemake workflow topology. Updated Dockerfile to compatible jax cuda versions. Included analysis container in CI/CD

* Run container build in parallel

* Free container space for analysis image

* Updated container paths in Snakefile

* Moved snakemake pipeline to kosinskilab/AlphaPulldownSnakemake

* Added tag for container from the release. Add test_feats_with_templates

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Co-authored-by: maurerv <valentin.maurer@embl-hamburg.de>
2024-04-25 11:18:14 +02:00