13 Commits

Author	SHA1	Message	Date
samsledje	5b95875b98	change language_model.py to use with h5py context	2022-08-26 14:56:34 -04:00
samsledje	988c1b35ff	update language model to fix issue #35	2022-08-18 12:10:32 -04:00
samsledje	dfbc81829f	use biopython for fasta io	2022-06-23 13:36:06 -04:00
samsledje	b72db922c1	language model module use log function	2022-02-11 16:30:12 -05:00
samsledje	a82dd7d6b8	code style updated with black	2022-02-08 12:00:11 -05:00
Samuel Sledzieski	dc04e373e3	put model in eval mode before making new predictions	2020-11-30 15:58:43 -05:00
Samuel Sledzieski	c253373788	updated prediction and evaluation bugs, pretrained model loading	2020-11-18 14:31:22 -05:00
Samuel Sledzieski	64f80d935d	updated lm embedding function to download model from cb site	2020-11-17 13:09:26 -05:00
Samuel Sledzieski	1e9250dc1e	updated bug in contact	2020-11-17 10:27:11 -05:00
Sam Sledzieski	0276d29ced	Fix device setting package-wide	2020-11-17 09:44:13 -05:00
Sam Sledzieski	27c029bd4f	Documentation version 1	2020-11-16 21:53:26 -05:00
Samuel Sledzieski	4e4083b530	black code formatting	2020-11-16 18:54:37 -05:00
Sam Sledzieski	0e912f5dd0	Clean docs	2020-11-16 18:26:57 -05:00