18 Commits

Author	SHA1	Message	Date
woodsh17	4aea4fd65a	Change design_nickel.sh num_designs back to 15	2025-10-23 12:26:00 -05:00
woodsh17	681874e6ea	Reduce length for design_tetrahedral_oligos to 600 to reduce run time	2025-10-22 15:16:41 -05:00
woodsh17	e2378c7358	Change num_designs in examples back to 10, since this is reset in test_diffusion.py	2025-10-17 10:51:44 -05:00
woodsh17	778f8d4b28	Fix input_pdb path in design_macrocyclic_binder and fix incorrect call to res in test_diffusion.py	2025-10-10 15:21:04 -05:00
woodsh17	f43a81d59d	Changing number of designs for examples from 10 to 2 to speed up tests	2025-10-10 13:53:59 -05:00
woodsh17	2d157302d3	Adjusting command format for design_macrocyclic_binder.sh and design_macrocyclic_monomer.sh	2025-10-10 09:36:45 -05:00
David Juergens	b1ba556871	add .sh examples, gabarap pdb, import numpy	2025-06-22 17:56:19 -07:00
Joseph Watson	b44206a2a7	correct example	2024-08-26 10:35:40 -07:00
Joseph Watson	f6ac51ee84	Added example	2024-08-26 10:35:40 -07:00
Joseph Watson	46c0ef6803	Implemented inpaint_str and added example	2023-09-13 17:05:04 -07:00
Joseph Watson	ba8446eae0	Added input pdb for p53 case	2023-07-25 10:47:14 -07:00
Joseph Watson	47b738f604	Added p53 scaffolding example	2023-07-25 10:47:14 -07:00
Joseph Watson	5f924fe2e3	Added examples, and updated README	2023-05-05 16:43:02 -07:00
Joseph Watson	5c6f2f1b14	Made necessary changes for integration tests based on example submissions	2023-05-05 16:43:02 -07:00
Ryan Henderson	10fdde9d25	fix output directory for multipleseq example	2023-04-26 09:07:58 -07:00
Ryan Henderson	7b3cc0f682	add example of partial diffusion with multiple sequences	2023-04-26 09:07:58 -07:00
Sam DeLuca	94fb2d8d1c	restructuring library as a python module	2023-04-03 14:33:05 -07:00
Joseph Watson	4c621496e3	Initial commit to RFdiffusion	2023-03-30 04:56:09 -07:00