Various fixes

- Fixed paths
- Uniclust 2020 is the default sequence database
- Few fixes to allow parallel processing of DSSP/MSAs.
This commit is contained in:
Jérôme Tubiana
2021-10-31 10:37:01 +02:00
parent 8cb616a6ee
commit 162d696777
7 changed files with 22 additions and 10 deletions

View File

@@ -331,7 +331,7 @@ def load_chains(pdb_id=None,
if (file is None) & (pdb_id is not None):
file = getPDB(pdb_id, biounit=biounit, structures_folder=structures_folder)[0]
else:
pdb_id = 'abcd'
pdb_id = file.split('/')[-1].split('.')[0][-4:]
if file[-4:] == '.cif':
parser = mmcifparser