Benjamin Perry fca90950d3 adding MMseqs vs. NHMMER options to alphafast run script and database download

2026-03-18 13:16:57 -04:00

..

alphafast.env.template

initial commit

2026-02-17 14:10:40 -05:00

build_rna_mmseqs_dbs.sh

adding MMseqs vs. NHMMER options to alphafast run script and database download

2026-03-18 13:16:57 -04:00

queue_worker.py

initial commit

2026-02-17 14:10:40 -05:00

run_alphafast.sh

adding MMseqs vs. NHMMER options to alphafast run script and database download

2026-03-18 13:16:57 -04:00

run_msa_producer_consumer.sh

updating paths in docker to data/ instead of root/ to avoid root perms issue

2026-02-27 21:34:44 -05:00

run_multigpu.sh

iniital testing scripts for dna/rna support

2026-03-16 14:08:16 -04:00

setup_databases.sbatch

initial commit

2026-02-17 14:10:40 -05:00

setup_databases.sh

adding temporary test of mmseqs RNA/DNA search + NHmmer fallback

2026-03-17 20:04:24 -04:00