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Explain what to do if downloading PDB mmCIF files is too slow.

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PiperOrigin-RevId: 424887480
Change-Id: I4ea7a2aba785d037f49cf22c503ebebe3303e468
This commit is contained in:
Augustin Zidek
2022-01-28 09:30:01 -08:00
committed by Copybara-Service
parent 57a2455e5f
commit e93a9eb64f
1 changed files with 4 additions and 0 deletions
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scripts/download_pdb_mmcif.sh
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@@ -40,6 +40,10 @@ RAW_DIR="${ROOT_DIR}/raw"
MMCIF_DIR="${ROOT_DIR}/mmcif_files"
echo "Running rsync to fetch all mmCIF files (note that the rsync progress estimate might be inaccurate)..."
echo "If the download speed is too slow, try changing the mirror to:"
echo " * rsync.ebi.ac.uk::pub/databases/pdb/data/structures/divided/mmCIF/ (Europe)"
echo " * ftp.pdbj.org::ftp_data/structures/divided/mmCIF/ (Asia)"
echo "or see https://www.wwpdb.org/ftp/pdb-ftp-sites for more download options."
mkdir --parents "${RAW_DIR}"
rsync --recursive --links --perms --times --compress --info=progress2 --delete --port=33444 \
rsync.rcsb.org::ftp_data/structures/divided/mmCIF/ \