Files
alphafold/server/example.json
DeepMind 24fbdfc3ce Update JSON format docs with new template on/off, cutoff date fields.
PiperOrigin-RevId: 720186008
Change-Id: I53b84c0b52509f93e85cc8705aeba4888398f5bb
2025-01-27 08:48:48 -08:00

128 lines
2.5 KiB
JSON

[
{
"name": "Test Fold Job Number One",
"modelSeeds": [],
"sequences": [
{
"proteinChain": {
"sequence": "PREACHINGS",
"glycans": [
{
"residues": "NAG(NAG)(BMA)",
"position": 8
},
{
"residues": "BMA",
"position": 10
}
],
"modifications": [
{
"ptmType": "CCD_HY3",
"ptmPosition": 1
},
{
"ptmType": "CCD_P1L",
"ptmPosition": 5
}
],
"count": 1,
"maxTemplateDate": "2018-01-20"
}
},
{
"proteinChain": {
"sequence": "REACHER",
"count": 1,
"useStructureTemplate": false
}
},
{
"dnaSequence": {
"sequence": "GATTACA",
"modifications": [
{
"modificationType": "CCD_6OG",
"basePosition": 1
},
{
"modificationType": "CCD_6MA",
"basePosition": 2
}
],
"count": 1
}
},
{
"dnaSequence": {
"sequence": "TGTAATC",
"count": 1
}
},
{
"rnaSequence": {
"sequence": "GUAC",
"modifications": [
{
"modificationType": "CCD_2MG",
"basePosition": 1
},
{
"modificationType": "CCD_5MC",
"basePosition": 4
}
],
"count": 1
}
},
{
"ligand": {
"ligand": "CCD_ATP",
"count": 1
}
},
{
"ligand": {
"ligand": "CCD_HEM",
"count": 2
}
},
{
"ion": {
"ion": "MG",
"count": 2
}
},
{
"ion": {
"ion": "NA",
"count": 3
}
}
],
"dialect": "alphafoldserver",
"version": 1
},
{
"name": "Test Fold Job Number Two",
"modelSeeds": [],
"sequences": [
{
"proteinChain": {
"sequence": "TEACHINGS",
"count": 1,
"maxTemplateDate": "2024-05-08"
}
},
{
"dnaSequence": {
"sequence": "TAGGACA",
"count": 1
}
}
],
"dialect": "alphafoldserver",
"version": 1
}
]