Augustin Zidek
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02650a5ded
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Use --run_*=false instead of --norun_* in docs.
PiperOrigin-RevId: 886655698
Change-Id: If37e31d659c5b31856ce9bb6cb215b49bb7a96f8
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2026-03-20 02:19:27 -07:00 |
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Augustin Zidek
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805adc3863
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Add option to run Jackhmmer/Nhmmer genetic search in sharded mode (10-30x faster)
PiperOrigin-RevId: 825546064
Change-Id: Ib421e47bb9ca7eea512c49a532e7e995a0f5721f
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2025-10-29 07:55:10 -07:00 |
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Augustin Zidek
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46fe3f0f60
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Add documentation for pre-computing and reusing MSA and templates
PiperOrigin-RevId: 825092403
Change-Id: Idfeb86387ad3e83f5742cfa19e18f6faf3530315
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2025-10-28 10:09:19 -07:00 |
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Augustin Zidek
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9c183c8234
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Make the ordering of the performance documentation more logical
PiperOrigin-RevId: 824606495
Change-Id: Ie4e8558a95e4ddf43f2bb7486e025322f4b6860c
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2025-10-27 11:35:17 -07:00 |
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Augustin Zidek
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903a931d36
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Improve documentation on running data pipeline and inference separately
Prompted by https://github.com/google-deepmind/alphafold3/issues/485.
PiperOrigin-RevId: 789700619
Change-Id: I0e876a1130cc537421e8916fcad1230302196b64
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2025-08-01 03:56:58 -07:00 |
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Augustin Zidek
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537a9e1d16
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Explain the pair_transition_shard_spec format
PiperOrigin-RevId: 715803444
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2025-01-16 14:27:02 +00:00 |
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Jacob Kelly
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781d8d04f9
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Add XLA flag workaround for CUDA Capability 7.x GPUs
PiperOrigin-RevId: 705559274
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2024-12-13 06:35:21 +00:00 |
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Augustin Zidek
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e56abb7a55
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Update advice for different devices
PiperOrigin-RevId: 700993687
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2024-11-28 16:44:11 +00:00 |
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Jacob Kelly
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b108eedc04
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Add a table of H100 inference timings to docs/performance.md
PiperOrigin-RevId: 697644061
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2024-11-18 16:53:42 +00:00 |
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Augustin Zidek
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4b2b567103
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Documentation updates - older GPUs and JAX installation
PiperOrigin-RevId: 697634146
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2024-11-18 16:21:14 +00:00 |
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Jacob Kelly
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2ffe43f574
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Fix pallas GLU kernel on large inputs and update documentation for compilation buckets.
PiperOrigin-RevId: 696513320
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2024-11-14 15:20:38 +00:00 |
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Augustin Zidek
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0341fb7f24
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Documentation fixes and silence irrelevant warning
PiperOrigin-RevId: 695740242
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2024-11-12 16:24:34 +00:00 |
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Augustin Zidek
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4f52a3bb62
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Initial release of AlphaFold 3
PiperOrigin-RevId: 695257954
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2024-11-11 10:42:47 +00:00 |
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