# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

name: Python package

on:
  push:
    branches: [master]
  pull_request:
    branches: [master]

jobs:
  build:
    runs-on: ubuntu-latest
    if: "!contains(github.event.head_commit.message, 'noci')"
    strategy:
      matrix:
        python-version: [3.10]

    steps:
      - uses: actions/checkout@v2
      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v2
        with:
          python-version: ${{ matrix.python-version }}
      - name: Install dependencies
        run: |
          python -m pip install --upgrade pip
          pip install black flake8 pytest coverage
          if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
          pip install -e .
      - name: Lint with flake8
        run: |
          # until we get rid of Python 3.6, this will fail
          # stop the build if there are Python syntax errors or undefined names
          flake8 apbs --count --select=E9,F63,F7,F82 --show-source --statistics
          # exit-zero treats all errors as warnings.
          flake8 apbs --count --exit-zero --statistics
          #echo "Skipping flake8"
      - name: Test with pytest and coverage
        run: |
          coverage run --source=apbs -m pytest test
          coverage report -m | tee coverage.txt
          coverage html
      - name: Upload coverage results
        run: bash <(curl -s https://codecov.io/bash)
      - name: Store coverage text results
        uses: actions/upload-artifact@v2
        with:
          name: coverage-text
          path: coverage.txt
      - name: Store coverage HTML results
        uses: actions/upload-artifact@v2
        with:
          name: coverage-html
          path: htmlcov/*