mirror of
https://github.com/Electrostatics/apbs.git
synced 2026-06-04 12:44:23 +08:00
cbb232e571
* Added support and examples for PYGBE * Changed absolute path * Try to please flake8 * Fixed tests, Python parser for pygbe, and added documentation * Reduce generated artifacts * noci Attempt to fix Appveyor * noci Attempt 2 to fix Appveyor * noci Updating CMake files to version 3 * noci Update CMake in externals * updating submodule to latest * noci update appveyor * Figure out testing for protein-rna * Skipping protein-rna testing * Hardcode CMake install directory for include files * Turn on verbose CMake output * noci Turn on verbose CMake output * noci Fix program files path * noci Fix cmake path * noci chore Adding script to test examples * noci chore Update build scripts Co-authored-by: Darren Curtis <intendo23@gmail.com>
30 lines
677 B
Bash
Executable File
30 lines
677 B
Bash
Executable File
#!/bin/bash
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APBS_EXE="apbs"
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BASE_PATH="$( cd -- "$(dirname "$0")" >/dev/null 2>&1 ; pwd -P )"
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export PATH="$BASE_PATH/../../../bin:$PATH"
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cd $BASE_PATH
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EXCLUDE="pygbe"
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DIRS=`find . -maxdepth 1 -type d -name "[a-zA-Z]*" | awk -F'/' '{print $NF}' | grep -v $EXCLUDE`
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for dir in $DIRS
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do
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cd $BASE_PATH
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cd $dir
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for infile in `ls -1 *.in`
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do
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echo -n "$APBS_EXE $dir/$infile "
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SECONDS=0
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#/dev/null 2>&1
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$APBS_EXE $infile > OUTPUT.txt 2>&1
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status=$?
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duration=$SECONDS
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echo "$(($duration / 60)) minutes and $(($duration % 60)) seconds elapsed."
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if [[ "$status" -ne "0" ]]; then
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echo "***** $infile, $status: failed"
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fi
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done
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done
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