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peizhou/negative__patch
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35 Commits

Author SHA1 Message Date
Jiahang Li
d381f2263d [Dataset] MovieLens (#5567) 
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-17-164.ap-northeast-1.compute.internal>
 2023-06-19 16:48:27 +08:00
OlegPlatonov
921476c8c6 [Dataset] Add heterophilous graphs. (#5853) 
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2023-06-15 09:14:19 +08:00
Mufei Li
a244de579c [Dataset] WisconsinDataset (#5520) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-04-04 16:44:26 +08:00
Mufei Li
dd4c74ff32 [Dataset] CornellDataset and TexasDataset (#5513) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-04-03 16:16:37 +08:00
Mufei Li
2b5921e759 [Dataset] Actor (#5511) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-03-31 10:28:50 +08:00
Mufei Li
690f37bbe9 update (#5507) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-03-28 19:22:44 +08:00
Mufei Li
9e532e7def [Dataset] Chameleon (#5477) 
* update

* update

* update

* lint

* update

* CI

* lint

* update doc

---------

Co-authored-by: Ubuntu <ubuntu@ip-172-31-36-188.ap-northeast-1.compute.internal>
 2023-03-23 22:34:00 +08:00
ZhenyuLU_Heliodore
4534650f5f [Dataset] Add ZINC Dataset (#5428) 
* Update dgl.data.rst

* Add files via upload

* Add files via upload

* Add files via upload

* Update zinc.py

* Update dgl.data.rst

* Update test_data.py

* Add files via upload

* Update cluster.py

* Update pattern.py

* Update zinc.py

* Update zinc.py

* Update test_data.py

* lint

* fix

* fix path

* update test on label shape

---------

Co-authored-by: rudongyu <ru_dongyu@outlook.com>
 2023-03-22 18:04:41 +08:00
Gleb Bazhenov
54b4bd0acd [Data] new functional for creating data splits in graph (#5418) 
* new functional for creating data splits in graph

* minor fix in data split implementation

* apply suggestions from code review

Co-authored-by: Mufei Li <mufeili1996@gmail.com>

* refactoring + unit tests

* fix test file name

* move imports to the top

* Revert "fix test file name"

This reverts commit 126323e38c.

* remove nccl submodule

* address linter issues

---------

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Hongzhi (Steve), Chen <chenhongzhi.nkcs@gmail.com>
 2023-03-09 18:55:25 +08:00
Guangyu Zhou
178290249e [Dataset] Add PATTERN dataset (#5422) 
* add PATTERN dataset

* fix bug

* fix bugs

* fix issues

* refine according to dongyu's comments

---------

Co-authored-by: BuptTab <gyzhou2000@gmail.com>
Co-authored-by: rudongyu <ru_dongyu@outlook.com>
 2023-03-08 14:08:12 +08:00
Zhiteng Li
a53ecd229b [Dataset] Add CLUSTER dataset (#5389) 
* add CLUSTER dataset

* refine according to dongyu's comments

---------

Co-authored-by: rudongyu <ru_dongyu@outlook.com>
 2023-03-01 16:36:12 +08:00
RecLusIve-F
defa292bc0 [Dataset] Add Flickr and Yelp dataset (#4099) 
* Add Flickr and Yelp dataset

* Update flickr.py

* update

* Update yelp.py

* Update yelp.py

* update

* Update yelp.py

* Update test_data.py

* Update yelp.py

* update

* Update test_data.py

* Update yelp.py

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2022-06-14 16:14:12 +08:00
RecLusIve-F
89655cfda2 [Dataset] Add WikiCS Dataset (#4035) 
* Fix bugs & Update dataset

* Update

* Update wikics.py

* Update wikics.py

* Update test_data.py

* Update wikics.py

* Update wikics.py

* Update wikics.py

* update

* Update module.py

* Update dgl.data.rst

* Update wikics.py

* Update wikics.py

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2022-06-02 23:03:17 +08:00
Mufei Li
d9c25521bc [Data] AsGraphPredDataset (#4073) 
* Update

* CI

* Update

* Update

* Fix

* Fix
 2022-06-02 16:18:48 +08:00
Mufei Li
bef993076e [Bugfix] Fix PinSAGE Benchmark (#4058) 
* Update

* Update

* Update dgl.data.rst

* CI
 2022-05-28 00:31:57 +08:00
Mufei Li
65b0b9e8c3 [Dataset & Transform] Synthetic Datasets for Explainability and SIGNDiffusion Transform (#3982) 
* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Update

* Fix

* Update

* Update

* Update
 2022-05-16 22:32:09 +08:00
Mufei Li
ec64581c96 [Doc] Misc fix for doc (#3782) 
* Update nn-pytorch.rst

* Update dgl.data.rst

* Update dgl.rst
 2022-02-28 16:03:32 +08:00
Mufei Li
6d9433b04f [Transform] [Doc] Rename transform to transforms and update doc (#3765) 
* Update

* Update

* Update

* Fix

* Update

* Update

* Update

* Fix
 2022-02-24 21:28:15 +08:00
Rhett Ying
2f4146a4c2 [Dataset] add train_idx/val_idx/test_idx as dataset attributes (#3769) 
* add train_idx/val_idx/test_idx as dataset attributes

* refine docstring
 2022-02-24 15:17:40 +08:00
Rhett Ying
4b182b9063 toctree typo for dataset adapters (#3764) 
* toctree typo for dataset adapters

* Update docs/source/api/python/dgl.data.rst
 2022-02-23 18:46:19 +08:00
RhettYing
6106a99d0a refine 2022-02-17 02:00:10 +00:00
RhettYing
e0f054fb27 [Doc] add doc for DGLCSVDataset 2022-02-17 00:52:16 +00:00
Jinjing Zhou
dc78e11c3f [Dataset] Adapter to convert a dataset for link prediction task (#3699) 
* add ut

* add doc link

* install dep

* add

* Revert "install dep"

This reverts commit e574a83771.

* add

* merge fix

* rm files

* fix

* fix

* fix

* fix

* fix typo

* fix tf

* fix

* fix

* fix

* fix

* fix

* fix dependency

* fix test

* fix

* fix

* add doc

* fix

* fix

* fix test

* fix test

Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
 2022-02-11 16:59:14 +08:00
Minjie Wang
5152a87982 [Data] Utility function and class for converting a dataset for node prediction (#3695) 
* add ut

* add doc link

* install dep

* fix  ci

* fix ut; more comments

* remove deprecated attributes in rdf datasets; fix label feature name

* address comments

* fix ut for other frameworks
 2022-01-30 14:31:37 +08:00
Kay Liu
9706eaa895 [Feature] add permission information and fix import problems (#3036) 
* [Feature] add positive negative statistics

* [Feature] add permission information and fix import problem

* fix backend incompatible problem

* modify random split to remove sklearn usage

* modify file read to remove pandas usage

* add datasets into doc

* add random seed in data splitting

* add dataset unit test

* usage permission information update

Co-authored-by: zhjwy9343 <6593865@qq.com>
 2021-06-21 11:55:15 +08:00
zhjwy9343
55e7796ac5 Revert "[Feature] add permission information and fix import problems (#2998)" (#3029) 
This reverts commit cba5b188b5.

Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
 2021-06-17 13:58:38 +08:00
Kay Liu
cba5b188b5 [Feature] add permission information and fix import problems (#2998) 
* [Feature] add positive negative statistics

* [Feature] add permission information and fix import problem

* fix backend incompatible problem

* modify random split to remove sklearn usage

* modify file read to remove pandas usage

* add datasets into doc

Co-authored-by: zhjwy9343 <6593865@qq.com>
 2021-06-16 18:24:17 +08:00
Hengrui Zhang
a1f59c3b68 [Feature] QM9Edge Dataset Support (#2704) 
* [Feature] Support QM9Edge Datset

* Update qm9_edge.py

* disable tqdm

* Update qm9_edge.py

* Update qm9_edge.py

* Update qm9_edge.py

* Update qm9_edge.py

* Update qm9_edge.py

* Update qm9_edge.py

* Update qm9_edge.py

* remove preprocessing part

* add comparisons in qm9.py

* [docs] add qm9edge dataset

Co-authored-by: Mufei Li <mufeili1996@gmail.com>
 2021-03-09 14:51:21 +08:00
xnouhz
2c6d071617 [Feature] QM9 Dataset Support (#2521) 
* [Model] MixHop for Node Classification task

* [docs] update

* [docs] update

* [fix] remove seed option

* [fix] update readme

* [feature] support qm9 dataset

* [style] update

* [docs] fix the details

* [fix] indexing only support int

* [style] update

* [fix] multiple backends support

* [docs] add qm9

* [fix] Z type: float32 -> int32

* [fix] Z type: int32 -> long

* [docs] add ref

* [docs] fix

* [docs] update

* [docs] update

* [fix] test eval

* [docs] fix example

Co-authored-by: xnuohz@126.com <ubuntu@ip-172-31-44-184.us-east-2.compute.internal>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
 2021-01-21 01:33:30 +08:00
Mufei Li
7a6d66682f Update dgl.data.rst (#2217) 2020-09-21 10:15:24 +08:00
Xiangkun Hu
6f26cfcaec [Doc] Fix links and references in dataset user guide (#2085) 
* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960.

* data pipeline user guide

* remove chapter numbers

* Update data.rst

* image in dataset userguide

* update links using ref

* modify the link of save_graphs and load_graphs in dataset user guide

* move image to s3 server.

* fix links and ref
 2020-08-21 21:09:26 +08:00
Minjie Wang
f13b9b6212 [Doc] Scan the API docs and make many changes (#2080) 
* WIP: api

* dgl.sampling, dgl.data

* dgl.sampling; dgl.dataloading

* sampling packages

* convert

* subgraph

* deprecate

* subgraph APIs

* All docstrings for convert/subgraph/transform

* almost all funcs under dgl namespace

* WIP: DGLGraph

* done graph query

* message passing functions

* lint

* fix merge error

* fix test

* lint

* fix

Co-authored-by: Quan Gan <coin2028@hotmail.com>
 2020-08-20 23:26:49 +08:00
Xiangkun Hu
62e69b67aa [Doc] Modify the link of save_graphs and load_graphs in dataset user guide (#2027) 
* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960.

* data pipeline user guide

* remove chapter numbers

* Update data.rst

* image in dataset userguide

* update links using ref

* modify the link of save_graphs and load_graphs in dataset user guide
 2020-08-15 09:21:08 +08:00
Xiangkun Hu
f4f78803cf [Doc] Update links by :ref in dataset user guide (#2024) 
* PPIDataset

* Revert "PPIDataset"

This reverts commit 264bd0c960.

* data pipeline user guide

* remove chapter numbers

* Update data.rst

* image in dataset userguide

* update links using ref
 2020-08-14 17:28:54 +08:00
Minjie Wang
c2cd6eb22e [Doc] Reorg doc (#1989) 2020-08-10 23:19:03 +08:00