pub_soft/dgl
3
0
Fork 0
mirror of https://github.com/dmlc/dgl.git synced 2026-06-04 19:44:23 +08:00
Code Issues Packages Projects Releases Wiki Activity
4,308 Commits 33 Branches 42 Tags
0978ce6571e165b010e2eadf9695f7580548af0f
Commit Graph

39 Commits

Author SHA1 Message Date
Hongzhi (Steve), Chen
0978ce6571 Reorder dependency list in setup (#7672) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2024-08-08 13:01:30 +08:00
Hongzhi (Steve), Chen
86fe4c20fc Remove datapipe from dgl dependency. (#7667) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2024-08-08 10:39:41 +08:00
Rhett Ying
b5fe4737bb [dev] add more dependencies into setup (#7570) 2024-07-23 07:56:31 +08:00
Rhett Ying
dfdfad2cdb Revert "[dev] limit numpy < 2.0.0 for compatibility" (#7496) 2024-07-01 11:33:51 +08:00
Rhett Ying
6294c4be16 [dev] limit numpy < 2.0.0 for compatibility (#7479) 2024-06-26 13:11:36 +08:00
Rhett Ying
396b0ec2d2 [release] add pandas into dependencies (#7218) 2024-03-18 10:24:02 +08:00
Rhett Ying
ade806b460 [dev] exclude dist dir (#7176) 2024-02-29 14:59:13 +08:00
Rhett Ying
5f653c32d6 [dev] remove build artifacts for cleanup (#7166) 2024-02-28 12:47:07 +08:00
Rhett Ying
ca675ed41d [GraphBolt] add torchdata into DGL dependencies (#6809) 2023-12-22 11:26:36 +08:00
Rhett Ying
7eeac69a74 [dev] remove torchdata from dep 2023-12-21 16:47:01 +08:00
Rhett Ying
4dd92922a7 [dev] do not specify version for torchdata 2023-12-21 16:36:35 +08:00
Rhett Ying
80763d4ba3 [dev] add torchdata dependency into DGL requirements (#6801) 2023-12-21 15:00:49 +08:00
Muhammed Fatih BALIN
f0d8ca1e40 [Dev] Change CXX standard to 17 (#6138) 2023-08-14 10:26:40 +08:00
Rhett Ying
57b037fda6 [dev] remove distutils from dependency (#6089) 2023-08-03 17:07:27 +08:00
Xin Yao
7eef3e0db3 [Bugfix] Fix setup.py (#5746) 2023-05-31 10:15:50 +08:00
peizhou001
cc5c237965 [GraphBolt]CI patch (#5707) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-25-242.ap-northeast-1.compute.internal>
 2023-05-19 10:18:15 +08:00
Ilia Taraban
acb4eb7ecd [Feature] Add bfloat16 support for CPU (#5497) 
Co-authored-by: Hongzhi (Steve), Chen <chenhongzhi.nkcs@gmail.com>
 2023-04-06 11:16:41 +02:00
Hongzhi (Steve), Chen
3e5137feaf [Misc] Autoformat python dgl (Part 2). (#5332) 
Co-authored-by: Ubuntu <ubuntu@ip-172-31-28-63.ap-northeast-1.compute.internal>
 2023-02-20 20:56:25 +08:00
czkkkkkk
7c059e86c7 [Sparse] Add sparse matrix C++ implementation (#4773) 
* [Sparse] Add sparse matrix C++ implementation

* Add documentation

* Update

* Minor fix

* Move Python code to dgl/mock_sparse2

* Move headers to include

* lint

* Update

* Add dgl_sparse directory

* Move src code to dgl_sparse

* Add __init__.py in tests to avoid naming conflict

* Add dgl sparse so in Jenkinsfile

* Complete docstring & SparseMatrix basic op

* lint

* Disable win tests
 2022-11-07 18:01:19 +08:00
Hongzhi (Steve), Chen
98325b1097 [Misc] Black auto fix. (#4691) 
Co-authored-by: Steve <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>
 2022-10-10 10:53:51 +08:00
Quan (Andy) Gan
14cafe73e2 bump version (#4667) 
* bump version

* Update setup.py

* Update setup.py
 2022-10-01 00:47:38 +08:00
Hongzhi (Steve), Chen
701c6fe754 [Readability] Auto fix setup.py and update-version.py (#4446) 
* Auto fix update-version

* Auto fix setup.py

* Auto fix update-version

* Auto fix setup.py

* [Doc] Change random.py to random_partition.py in guide on distributed partition pipeline (#4438)

* Update distributed-preprocessing.rst

* Update

Co-authored-by: Ubuntu <ubuntu@ip-172-31-9-26.ap-northeast-1.compute.internal>

* fix unpinning when tensoradaptor is not available (#4450)

* [Doc] fix print issue in tutorial (#4459)

* [Example][Refactor] Refactor RGCN example (#4327)

* Refactor full graph entity classification

* Refactor rgcn with sampling

* README update

* Update

* Results update

* Respect default setting of self_loop=false in entity.py

* Update

* Update README

* Update for multi-gpu

* Update

* [doc] fix invalid link in user guide (#4468)

* [Example] directional_GSN for ogbg-molpcba (#4405)

* version-1

* version-2

* version-3

* update examples/README

* Update .gitignore

* update performance in README, delete scripts

* 1st approving review

* 2nd approving review

Co-authored-by: Mufei Li <mufeili1996@gmail.com>

* Clarify the message name, which is 'm'. (#4462)

Co-authored-by: Ubuntu <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>
Co-authored-by: Rhett Ying <85214957+Rhett-Ying@users.noreply.github.com>

* [Refactor] Auto fix view.py. (#4461)

Co-authored-by: Ubuntu <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* [Example] SEAL for OGBL (#4291)

* [Example] SEAL for OGBL

* update index

* update

* fix readme typo

* add seal sampler

* modify set ops

* prefetch

* efficiency test

* update

* optimize

* fix ScatterAdd dtype issue

* update sampler style

* update

Co-authored-by: Quan Gan <coin2028@hotmail.com>

* [CI] use https instead of http (#4488)

* [BugFix] fix crash due to incorrect dtype in dgl.to_block() (#4487)

* [BugFix] fix crash due to incorrect dtype in dgl.to_block()

* fix test failure in TF

* [Feature] Make TensorAdapter Stream Aware (#4472)

* Allocate tensors in DGL's current stream

* make tensoradaptor stream-aware

* replace TAemtpy with cpu allocator

* fix typo

* try fix cpu allocation

* clean header

* redirect AllocDataSpace as well

* resolve comments

* [Build][Doc] Specify the sphinx version (#4465)

Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>

* reformat

* reformat

* Auto fix update-version

* Auto fix setup.py

* reformat

* reformat

Co-authored-by: Ubuntu <ubuntu@ip-172-31-34-29.ap-northeast-1.compute.internal>
Co-authored-by: Rhett Ying <85214957+Rhett-Ying@users.noreply.github.com>
Co-authored-by: Mufei Li <mufeili1996@gmail.com>
Co-authored-by: Ubuntu <ubuntu@ip-172-31-9-26.ap-northeast-1.compute.internal>
Co-authored-by: Xin Yao <xiny@nvidia.com>
Co-authored-by: Chang Liu <chang.liu@utexas.edu>
Co-authored-by: Zhiteng Li <55398076+ZHITENGLI@users.noreply.github.com>
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com>
Co-authored-by: rudongyu <ru_dongyu@outlook.com>
Co-authored-by: Quan Gan <coin2028@hotmail.com>
 2022-09-14 13:36:18 +08:00
Daniil Sizov
5561af4517 [Feature] Dataloader worker affinitization (#3723) 
* PR3355 + CSR conversion workaround

* Remove debug code

* Fix convention errors

* Remove wrongly added code section during merge

* Update to reflect dataloading changes

* Fix missing changes

* Remove comment

* Fix linter errors

* Fix trailing whitespace

* Add wrapper around worker init function

Co-authored-by: Quan (Andy) Gan <coin2028@hotmail.com>
 2022-04-28 13:00:04 +08:00
Mufei Li
dfa32ae092 [NN] GNNExplainer (#3490) 
* Update

* Update

* Update

* Fix

* Update

* Update

* Update

* Update

* Update

* Update

* Fix

* Fix

* Update

* Update

* Update

* Update

* Update

* Update

* lint fix

* lint fix

* Fix lint

* Update

* Fix CI

* Fix CI

* Fix

* CI

* Fix

* Update

* Fix

* Fix

* Fix CI

* Fix CI
 2021-11-11 02:22:22 +08:00
Jinjing Zhou
0346b0aa80 [Test] Add test for Cython and force rebuild when run setup.py (#2635) 2021-02-05 22:38:46 +08:00
Quan (Andy) Gan
47c9380555 [Performance] Fix Cython not being imported after switching to RTLD_LOCAL (#2608) 
* fix

* ?

Co-authored-by: Jinjing Zhou <VoVAllen@users.noreply.github.com>
 2021-02-02 16:23:54 +08:00
Quan (Andy) Gan
9a7235faf2 [Performance] Use allocator from PyTorch if possible (#2328) 
* first commit

* some thoughts

* move around

* more commit

* more fixes

* now it uses torch allocator

* fix symbol export error

* fix

* fixes

* test fix

* add script

* building separate library per version

* fix for vs2019

* more fixes

* fix on windows build

* update jenkinsfile

* auto copy built dlls for windows

* lint and installation guide update

* fix

* specify conda environment

* set environment for ci

* fix

* fix

* fix

* fix again

* revert

* fix cmake

* fix

* switch to using python interpreter path

* remove scripts

* debug

* oops sorry

* Update index.rst

* Update index.rst

* copies automatically, no need for this

* do not print message if library not found

* tiny fixes

* debug on nightly

* replace add_compile_definitions to make CMake 3.5 happy

* fix linking to wrong lib for multiple pytorch envs

* changed building strategy

* fix nightly

* fix windows

* fix windows again

* setup bugfix

* address comments

* change README
 2020-12-25 13:57:51 +08:00
Minjie Wang
537d37c26c [Misc] add requests as the package dependency (#1268) 2020-02-17 23:45:17 +08:00
Quan (Andy) Gan
bdcba9c85c setup for prerelease builds (#763) 2019-08-14 23:13:37 +08:00
Minjie Wang
d3cd60142c [Build] fix setup script to allow cython ext (#444) 2019-03-08 18:23:38 -05:00
Minjie Wang
ca2a7e1ca1 [Refactor] Nodeflow, sampling, CAPI (#430) 
* enable cython

* add helper function and data structure for void_p vector return

* move sampler from graph index to contrib.sampling

* WIP

* WIP

* refactor layer sampling

* pass tests

* fix lint

* fix graphsage

* remove comments

* pickle test

* fix comments

* update dev guide for cython build
 2019-03-05 14:07:22 -05:00
Minjie Wang
af23c45726 [Release] update version (#297) 
* update version; add news.md; modify contributing.md

* change urls to dmlc
 2018-12-11 15:40:51 -05:00
Sheng Zha
f720ce13e1 [Build] support universal wheel on linux (#272) 2018-12-06 18:06:58 -05:00
Minjie Wang
612a7fb996 [Release] setup version (#264) 2018-12-05 19:33:06 -05:00
Gan Quan
a8fa85c7d5 Conda builds (#187) 
* conda recipe

* switching to source build

* trying windows build

* wip

* windows build works
 2018-11-29 02:21:53 -05:00
Minjie Wang
2c2b747808 [Install] pip install (#180) 
* add bdist_wheel build

* fix wheel build

* fix setup

* fix ci

* fix setup

* fix

* fix setup

* poke ci

* fix

* poke ci

* clean build

* fix ci

* addback the env
 2018-11-27 00:47:01 -05:00
Minjie Wang
c468e06867 some fix 2018-10-05 10:38:44 -04:00
Minjie Wang
11e42d1094 Batching semantics and naive frame storage (#31) 
* batch message_func, reduce_func and update_func

Conflicts:
	python/dgl/backend/pytorch.py

* test cases for batching

Conflicts:
	python/dgl/graph.py

* resolve conflicts

* setter/getter

Conflicts:
	python/dgl/graph.py

* test setter/getter

Conflicts:
	python/dgl/graph.py

* merge DGLGraph and DGLBGraph

Conflicts:
	python/dgl/graph.py

Conflicts:
	python/dgl/graph.py

* batchability test

Conflicts:
	python/dgl/graph.py

Conflicts:
	python/dgl/graph.py

* New interface (draft)

Conflicts:
	_reference/gat_mx.py
	_reference/molecular-gcn.py
	_reference/molecular-gcn_mx.py
	_reference/multi-gcn.py
	_reference/multi-gcn_mx.py
	_reference/mx.py
	python/dgl/graph.py

* Batch operations on graph

Conflicts:
	.gitignore
	python/dgl/backend/__init__.py
	python/dgl/backend/numpy.py
	python/dgl/graph.py

* sendto

* storage

* NodeDict

* DGLFrame/DGLArray

* scaffold code for graph.py

* clean up files; initial frame code

* basic frame tests using pytorch

* frame autograd test passed

* fix non-batched tests

* initial code for cached graph; tested

* batch sendto

* batch recv

* update routines

* update all

* anonymous repr batching

* specialize test

* igraph dep

* fix

* fix

* fix

* fix

* fix

* clean some files

* batch setter and getter

* fix utests
 2018-07-30 14:10:37 -04:00
Minjie Wang
beaeb8a827 Setup Jenkins (#30) 
* jenkins init

* fix

* fix

* fix

* fix

* fix

* fix

* fix

* fix

* fix

* fix

* fix

* test succ (#1)

* test succ

* test fail

* fix fail

* fix jenkins

* icon

* icon

* icon
 2018-07-22 18:38:37 -04:00