xiang song(charlie.song)
a7e941c379
[Feature] Add support for sparse embedding ( #2451 )
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* Add sparse embedding for dgl and update rgcn example
* upd
* Fix
* Revert "Fix"
This reverts commit 4da87cdfb8ubuntu@ip-172-31-56-220.ec2.internal >
2021-01-28 00:26:49 +08:00
Tong He
0855d25501
[NN] Support scalar edge weight for GraphConv, SAGEConv and GINConv ( #2557 )
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* add edge weight in forward
* fix lint
* fix
* fix
* address comments
* add utils
* add util to normalize in gcn way
* fix lint
* add unittest
* fix lint
* fix docstring
* fix docstring
* address comments
* improve notation consistence
* use preferred fn
2021-01-26 23:34:12 +08:00
Zihao Ye
baace710cf
[documentation] Improve the docstring of global pooling layer ( #2437 )
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* upd
* fix-link
* lint
2020-12-21 10:12:54 +08:00
Minjie Wang
f13b9b6212
[Doc] Scan the API docs and make many changes ( #2080 )
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* WIP: api
* dgl.sampling, dgl.data
* dgl.sampling; dgl.dataloading
* sampling packages
* convert
* subgraph
* deprecate
* subgraph APIs
* All docstrings for convert/subgraph/transform
* almost all funcs under dgl namespace
* WIP: DGLGraph
* done graph query
* message passing functions
* lint
* fix merge error
* fix test
* lint
* fix
Co-authored-by: Quan Gan <coin2028@hotmail.com >
2020-08-20 23:26:49 +08:00
Mufei Li
be444e52d9
[Doc/Feature] Refactor, doc update and behavior fix for graphs ( #1983 )
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* Update graph
* Fix for dgl.graph
* from_scipy
* Replace canonical_etypes with relations
* from_networkx
* Update for hetero_from_relations
* Roll back the change of canonical_etypes to relations
* heterograph
* bipartite
* Update doc
* Fix lint
* Fix lint
* Fix test cases
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Update
* Fix test
* Fix
* Update
* Use DGLError
* Update
* Update
* Update
* Update
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Fix
* Fix
* Update
* Update
* Update
* Update
* Update
* Update
* rewrite sanity checks
* delete unnecessary checks
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Fix
* Update
* Update
* Update
* Fix
* Fix
* Fix
* Update
* Fix
* Update
* Fix
* Fix
* Update
* Fix
* Update
* Fix
Co-authored-by: xiang song(charlie.song) <classicxsong@gmail.com >
Co-authored-by: Minjie Wang <wmjlyjemaine@gmail.com >
Co-authored-by: Quan Gan <coin2028@hotmail.com >
2020-08-18 04:26:29 +08:00
Quan (Andy) Gan
1f7b219594
[Doc] User guide section 5 and 6 ( #2029 )
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* [Doc] User guide section 5 and 6
* oops
* fix
2020-08-17 09:47:01 +08:00
Tianjun Xiao
69f5869f3b
[Doc] NN doc refactor Conv Layers ( #1672 )
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* go through gcn, relgcn
* fix tagconv formula
* fix doc in sageconv
* fix sgconv doc
* replace hat with tilde
* more comments on gmmconv
* fix agnnconv chebconv doc
* modify nnconv doc
* remove &
* add nn conv examples
* Rebase master
* More merge conflicts
* check homo
* add back self loop for some convs, check homo in tranform
* add example for denseconv
* add example and doc for dotgat and cfconv
* check in-degree for graphconv
* add language fix
* gconv address all comments
* another round of change based on api template
* change agnn
* go through agnn, appnp, atomic, cf, cheb, dense, gat, sage modules
* finish pytorch part of nn conv
* mxnet graphconv done
* tensorflow graphconv works
* add new modules into doc
* add comments to not split code
* refine doc
* resr
* more comments
* more fix
* finish conv and dense conv part api
* pylint fix
* fix pylink
* fix pylint
* more fix
* fix
* fix test fail because zere in degree
* fix test fail
* sage is not update for mxnet tf
Co-authored-by: Ubuntu <ubuntu@ip-172-31-0-81.us-east-2.compute.internal >
2020-08-12 18:47:19 +08:00
Zihao Ye
18bfec24cf
[hotfix] Refactor edge softmax module ( #1967 )
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* upd
* upd
* upd
* upd
* upd
* upd
* upd
* upd
2020-08-07 23:50:12 +08:00
Zihao Ye
ca302a13ac
[Feature] Add dgl.nn.*.Sequential for usability ( #1166 )
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* upd
* upd
* upd
* upd
* lint
* upd
* upd
* upd
* upd
Co-authored-by: VoVAllen <VoVAllen@users.noreply.github.com >
2020-01-09 12:39:22 +08:00
Mufei Li
cf9ba90fd4
[Chem] ACNN and various utilities ( #1117 )
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* Add several splitting methods
* Update
* Update
* Update
* Update
* Update
* Fix
* Update
* Update
* Update
* Update
* Fix
* Fix
* Fix
* Fix
* Fix
* Update
* Update
* Update
* Update
* Update
* Update
* Update
* Finally
* CI
2019-12-19 11:54:40 +08:00
VoVAllen
1e2abc9ae9
[Docs] Adjust doc ( #808 )
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* fix doc
* poke ci
* poke ci
* upd
* fix doc
* upd
* add title for all nn
* upd
2019-08-31 00:17:49 +08:00
Quan (Andy) Gan
98b825e3a1
[Doc][Conda] Fixing pytorch.nn.factory docs and Conda license ( #805 )
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* [Conda] Update license
* doc fixes
2019-08-28 16:56:31 +08:00
Quan (Andy) Gan
a5b661a23e
[Doc] Fixing pytorch nn factory docs ( #804 )
2019-08-28 16:23:06 +08:00
Quan (Andy) Gan
828e269cf4
[Doc] Fixing KNNGraph docs ( #803 )
2019-08-28 14:52:22 +08:00
Quan (Andy) Gan
dc19cd5687
[Example] Dynamic Graph CNN on Point Cloud ( #789 )
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* initial commit
* second commit
* another commit
* change docstring
* migrating to dgl.nn
* fixes
* docs
* lint
* multiple fixes
* doc
2019-08-28 09:21:57 +08:00
Zihao Ye
650f6ee1e0
[NN] Add commonly used GNN models from examples to dgl.nn modules. ( #748 )
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* gat
* upd
* upd sage
* upd
* upd
* upd
* upd
* upd
* add gmmconv
* upd ggnn
* upd
* upd
* upd
* upd
* add citation examples
* add README
* fix cheb
* improve doc
* formula
* upd
* trigger
* lint
* lint
* upd
* add test for transform
* add test
* check
* upd
* improve doc
* shape check
* upd
* densechebconv, currently not correct (?)
* fix cheb
* fix
* upd
* upd sgc-reddit
* upd
* trigger
2019-08-27 18:21:19 +08:00
Minjie Wang
708765f0a1
[NN] RGCN modules ( #744 )
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* rgcn module
* support id input
* WIP: model codes
* use faster index select
* dropout
* self loop
* WIP: link prediction
* fix lint
* WIP: docs
* docstring
* docstring
* merge two child classes
* mxnet rgcn module
* fix lint
* fix lint
* fix rename bug
* add uniform edge sampler
* fix fn name
* docstring
* fix mxnet rgcn module
* fix mx rgcn
* enable test on cuda
2019-08-23 16:38:48 -04:00
Zihao Ye
742d79a792
upd ( #741 )
2019-08-06 18:39:05 +08:00
Zihao Ye
5d3f470b72
[Feature] DGL Pooling modules ( #669 )
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* removal doc
* glob
* upd
* rm knn
* add softmax
* upd
* upd
* add broadcast and s2s
* optimize max_on
* forsaken changes to heterograph
* upd
* upd
* upd
* upd
* upd
* bugfix
* upd
* upd
* upd
* upd
* format upd
* upd format
* upd doc
* upd
* import order
* upd
* rm warnings
* fix
* upd test
* upd
* upd
* fix device
* upd
* upd
* upd
* upd
* remove 1.1
* upd
* trigger
* trigger
* add more tests
* fix device
* upd
* upd
* refactor
* fix?
* fix
* upd docstring
* refactor
* upd
* fix
* upd
* upd
* upd
* fix
* upd docs
* add shape
* refactor & upd doc
* upd doc
* upd
2019-08-06 01:43:25 +08:00
Minjie Wang
565f0c88fc
[WIP] [NN] Refactor NN package ( #406 )
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* refactor graph conv
* docs & tests
* fix lint
* fix lint
* fix lint
* fix lint script
* fix lint
* Update
* Style fix
* Fix style
* Fix style
* Fix gpu case
* Fix for gpu case
* Hotfix edgesoftmax docs
* Handle repeated features
* Add docstring
* Set default arguments
* Remove dropout from nn.conv
* Fix
* add util fn for renaming
* revert gcn_spmv.py
* mx folder
* fix wierd bug
* fix mx
* fix lint
2019-02-25 18:41:21 -05:00
