Commit Graph

11 Commits

Author SHA1 Message Date
Mufei Li
52c7ef49fc [Model Zoo] AttentiveFP (#955)
* Update

* Fix style

* Update

* Update

* Fix

* Update

* Update
2019-10-26 01:57:34 +08:00
Mufei Li
577cf2e63b [Model Zoo] Refactor and Add Utils for Chemistry (#928)
* Refactor

* Add note

* Update

* CI
2019-10-22 00:47:45 +08:00
VoVAllen
9c790b1143 [Dataset] Add CoraFull, Amazon, KarateClub, Coauthor Dataset (#855)
* convert np.ndarray to backend tensor

* add datasets

* add qm7

* add dataset

* add dataset

* fix

* change ppi

* tu dataset

* add datasets

* fix

* fix

* fix

* fix

* add docstring

* docs

* doc
2019-10-01 01:19:59 +08:00
VoVAllen
0fb13f7b9d [Feature] Data format (#728)
* Add serialization

* add serialization

* add serialization

* lalalalalalalala

* lalalalalalalala

* serialize

* serialize

* nnn

* WIP: import tvm runtime node system

* WIP: object system

* containers

* tested basic container composition

* tested custom object

* tmp

* fix setattr bug

* tested object container return

* fix lint

* some comments about get/set state

* fix lint

* fix lint

* update cython

* fix cython

* ffi doc

* fix doc

* WIP: using object system for graph

* c++ side refactoring done; compiled

* remove stale apis

* fix bug in DGLGraphCreate; passed test_graph.py

* fix bug in python modify; passed utest for pytorch/cpu

* fix lint

* Add serialization

* Add serialization

* fix

* fix typo

* serialize with new ffi

* commit

* commit

* commit

* save

* save

* save

* save

* commit

* clean

* Delete tt2.py

* fix lint

* Add serialization

* fix lint 2

* fix lint

* fix lint

* fix lint

* fix lint

* Fix Lint

* Add serialization

* Change to Macro

* fix

* fix

* fix bugs

* refactor

* refactor

* updating dmlc-core to include force flag

* trying tempfile

* delete leaked pointer

* Fix assert

* fix assert

* add comment and test case

* add graph labels

* add load labels

* lint

* lint

* add graph labels

* lint

*  fix windows

* fix

* update dmlc-core to latest

* fix

* fix camel naming
2019-09-09 20:57:51 +08:00
Mufei Li
189c2c0907 [Model Zoo] Refactor Model Zoo for Chemistry (#839)
* Update

* Update

* Update

* Update fix

* Update

* Update

* Refactor

* Update

* Update

* Update

* Update

* Update

* Update

* Fix style
2019-09-07 20:01:09 +08:00
kitaev-chen
a3febc061b [Model] Add GIN Model (#471)
* add gin model

* convert dataset.py to data_ont_the_fly way and put it into dgl.data module

* convert dataset.py to data_ont_the_fly way and put it into dgl.data module
python code checked

* modified document and reference TUDataset; checked python part and bypass cpp part due to error

* change tensor to numpy in dataset and transform in collate@Dataloader

* Change minor format issue

Change minor format issue

* moved logging; adjusted tqdm etc
2019-04-17 14:57:07 +08:00
VoVAllen
00fc680aae [Dataset] Add TUDataset (#473)
* add graph classification dataset

* add node label

* add TUDataset

* Modify to consistent with Qi Huang's implementation

* add docs

* Add docs

* Fix change of environment variable

* Update tu.py

* Update tu.py

* Fix error when add node with np.int64
2019-04-10 09:37:53 -04:00
Hao Zhang
788d8dd4ad [Model]PPI dataloader and inductive learning script. (#395)
* Create ppi.py

* Create train_ppi.py

* Update train_ppi.py

* Update train_ppi.py

* Create gat.py

* Update train.py

* Update train_ppi.py

* Update ppi.py

* Update train_ppi.py

* Update ppi.py

* Update train_ppi.py

* Update train_ppi.py

* Update ppi.py

* Update train_ppi.py

* update docs and readme
2019-02-17 16:41:30 -05:00
Mufei Li
3cbfc25a32 [Tutorial] Batched Graph Classification (#360)
* batched_graph_classification

* Fix

* Fix

* update tutorial with new dataset

* Final

* Fix doc for dataset

* small fix
2019-01-25 15:13:52 -05:00
Minjie Wang
abf12fc757 [Data] Synthetic dataset for graph classificaiton (#364)
* minigc dataset

* more comments

* sphinx
2019-01-25 10:47:47 -05:00
Mufei Li
3a0f86a663 [Doc] data (#198)
* Fix dataset

* Track data APIs
2018-11-30 11:40:22 -05:00