Commit Graph

24 Commits

Author SHA1 Message Date
Zihao Ye
d1d580ecc1 [feature & bugfix] adjacency_matrix_scipy, wrong order of edges in immutable graph. (#437)
* fix rgcn tutorial

* small fix

* upd

* findedge/s

* upd

* upd

* upd

* upd

* add test

* remove redundancy

* upd

* upd

* upd

* upd

* add edge_subgraph

* explicit cast

* add test immutable subg

* reformat

* reformat

* fix bug

* upd

* hotfix

* subgraph docs

* fix adj mat

* fix edges() order

* add test

* revert

* upd

* fix

* upd
2019-03-12 23:57:13 -04:00
Minjie Wang
a88f351174 [Doc] update doc string (#426) 2019-03-02 14:00:52 -05:00
Zihao Ye
dba2a5b628 [Doc] Add DGLSubGraph, and DGLGraph.readonly() interface to docs (#421)
* fix rgcn tutorial

* small fix

* upd

* findedge/s

* upd

* upd

* upd

* upd

* add test

* remove redundancy

* upd

* upd

* upd

* upd

* add edge_subgraph

* explicit cast

* add test immutable subg

* reformat

* reformat

* fix bug

* upd

* hotfix

* subgraph docs
2019-03-01 10:10:24 -05:00
Minjie Wang
565f0c88fc [WIP] [NN] Refactor NN package (#406)
* refactor graph conv

* docs & tests

* fix lint

* fix lint

* fix lint

* fix lint script

* fix lint

* Update

* Style fix

* Fix style

* Fix style

* Fix gpu case

* Fix for gpu case

* Hotfix edgesoftmax docs

* Handle repeated features

* Add docstring

* Set default arguments

* Remove dropout from nn.conv

* Fix

* add util fn for renaming

* revert gcn_spmv.py

* mx folder

* fix wierd bug

* fix mx

* fix lint
2019-02-25 18:41:21 -05:00
VoVAllen
bd9171d6cd [Doc Fix] Fix group_apply_edges docs display 2019-02-21 00:19:39 +08:00
Hao Zhang
788d8dd4ad [Model]PPI dataloader and inductive learning script. (#395)
* Create ppi.py

* Create train_ppi.py

* Update train_ppi.py

* Update train_ppi.py

* Create gat.py

* Update train.py

* Update train_ppi.py

* Update ppi.py

* Update train_ppi.py

* Update ppi.py

* Update train_ppi.py

* Update train_ppi.py

* Update ppi.py

* Update train_ppi.py

* update docs and readme
2019-02-17 16:41:30 -05:00
Mufei Li
3cbfc25a32 [Tutorial] Batched Graph Classification (#360)
* batched_graph_classification

* Fix

* Fix

* update tutorial with new dataset

* Final

* Fix doc for dataset

* small fix
2019-01-25 15:13:52 -05:00
Minjie Wang
abf12fc757 [Data] Synthetic dataset for graph classificaiton (#364)
* minigc dataset

* more comments

* sphinx
2019-01-25 10:47:47 -05:00
Mufei Li
3a868eb04b [Feature] Max readout and consecutive labeling for networkx (#341)
* Max readout and consecutive labeling

* Delete test_readout.py

* Delete test_basics.py

* Test case and fix

* Recover accidentally removed file

* Fix import order

* Fix test case

* Fix

* Fix

* Fix

* Fix

* Fix

* revert

* Fix

* Fix

* Fix
2019-01-10 12:58:05 -05:00
Minjie Wang
3edcaa1ed6 [Doc] small fix on the doc ref (#337) 2019-01-04 17:10:42 -05:00
Mufei Li
24bbdb745e [Feature] Reversed Graph and Transform Module (#331)
* reverse a graph

* Reverse a graph

* Fix

* Revert "Fix"

This reverts commit 1728826b4f.

* Fix

* Fix

* Delete vcs.xml

* Delete Project_Default.xml

* Fix

* Fix

* Fix

* Remove outdated test

* Reorg transform and update reverse (#2)

* Reorg transform and update reverse

* Fix doc and test

* Update test

* Resolve conflict

* CI oriented fix

* Remove outdated import

* Fix import

* Fix import

* define __all__ for wildcard imports

* Fix import

* Address circular imports

* Fix

* Fix test case

* Fix

* Fix

* Remove unused import

* Fix

* Fix

* Fix
2019-01-04 13:51:19 -05:00
Da Zheng
7aa494b3bc [Bugfix][Doc] explain the batch dimension in the doc and many fix (#266)
* add more unit tests for mxnet.

* fix.

* explain the batch dimension.

* update doc.

* disable unit tests on DFS.

* fix graph traversal.
2018-12-06 00:48:57 -05:00
VoVAllen
cd907cddfa [Tutorial] Add sse tutorial & MXNet Tutorial CI (#252)
* add sse tutorial

* add mxnet tutorial ci

* fix ci

* fix ci

* fix ci

* fix ci

* fix ci

* fix ci

* Fix ci

* Fix ci

* Fix ci

* fix ci

* fix ci

* fix ci

* fix ci

* fix ci

* fix ci

* Fix CI

Fix CI image

* permission fix

* fix a bug in the code.

* small fix

* fix doc

* fix ci

* shorten the iters

* fix

* remove extra file

* add load_backend api to dynamically switch to another backend

* try fix

* fix tutorial

* fix tutorial

* fix bug in tutorial
2018-12-05 16:21:44 -05:00
Lingfan Yu
274e1082f5 [Doc] API doc string for many components (#245)
* builtin function docstring

* init docstring

* view docstring

* add init to index and fix

* node /edge feature

* Example -> Examples

* fix func hyperlink

* traversal

* fix

* from/to_networkx docstring

* minor

* fix duplicate label

* comment about tensor framework

* from scipy sparse matrix

* fix format errors
2018-12-04 17:52:00 -05:00
Mufei Li
7cca500787 [Doc] Computing with DGLGraph (#212)
* Docs for graph computing

* Docs for graph computing

* Fix

* WIP

* update the docstring
2018-12-04 16:51:46 -05:00
Gan Quan
5680f8dc13 [DOC] Documentation strings for graph mutation, queries, and subgraphing (#207)
* docstrings for graph mutation & queries

* [Doc] contrib.sampler. (#200)

* subgraph docs

* updates
2018-12-02 14:41:25 -05:00
Mufei Li
3a0f86a663 [Doc] data (#198)
* Fix dataset

* Track data APIs
2018-11-30 11:40:22 -05:00
Mufei Li
485f6d3abd [Doc] udf (#195)
* Docstring for udf

* Track udf docs

* Improve

* Improved

* Delete udf.py

* Improve
2018-11-30 00:38:58 -05:00
Mufei Li
8dc6784b12 [Doc] docstring for BatchedDGLGraph + some fix (#184)
* Update doc

* Update batched_graph.py

* Fix

* Fix

* Fix

* Fix
2018-11-29 09:53:16 -05:00
Gan Quan
d6c80e0cf7 [API] bfs with edges (#132)
* bfs with edges

* dfs toy test case

* clean up

* style fix

* bugfix

* updating docs for bfs_edges and readouts
2018-11-11 17:19:55 -05:00
Minjie Wang
8ea359d125 [API] Message propagation APIs (#127)
* add examples in traversal.py

* message propagate methods

* use the new message propagation for tree-lstm

* update to the new name

* update propagate API doc

* update doc

* add propagate utest
2018-11-09 15:04:57 -05:00
Minjie Wang
7fe6d0c857 [Doc] Refactor API doc (#128)
* refactor API doc; add markup link in tutorials

* fix readme
2018-11-08 22:57:16 -05:00
Minjie Wang
1b06998465 doc for batched graph 2018-10-05 15:07:42 -04:00
Minjie Wang
c7b9f06946 Init sphinx doc 2018-10-05 14:57:09 -04:00