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foldingdiff/environment.yml
2022-07-12 20:32:48 +00:00

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YAML

name: protdiff
channels:
- defaults
- anaconda
- pytorch
- conda-forge
- huggingface
dependencies:
- python=3.8.5
- pytorch
- ca-certificates
- pillow==6.2.1
- py-xgboost==1.3.3
- sqlite=3.33.0
- openssl
- pandas~=1.1.5
- joblib==0.14.1
- numpy==1.19
- cloudpickle==1.6.0
- wheel=0.35.1
- cudatoolkit=11.3
- setuptools-git[version='>=1.2']
- certifi
- torchvision
- pip==20.1.1
- python_abi=3.8
- scikit-image
- wget
- jupyter
- gcc_linux-64==7.3.0
- jupyter_client
- nodejs
- jupyterlab
- jupyterlab-git
- torchaudio
- tqdm
- transformers=4.11
- matplotlib
- seaborn
- pytorch-lightning=1.6.4
- pip:
- sequence-models