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23 lines
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23 lines
982 B
Plaintext
# MPNN Documentation
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```{warning}
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The documentation for the MPNN model is currently incomplete.
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If you would like to contribute, feel free to open a PR.
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```
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```{warning}
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The MPNN model is still being benchmarked for comparison to the
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original ProteinMPNN, LigandMPNN, and SolubleMPNN implementations.
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```
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The MPNN model in [foundry](https://github.com/RosettaCommons/foundry)
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has all of the functionality of [ProteinMPNN](https://www.science.org/doi/10.1126/science.add2187),
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[LigandMPNN](https://www.nature.com/articles/s41592-025-02626-1),
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and [SolubleMPNN](https://www.nature.com/articles/s41586-024-07601-y),
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but with the backend support of [atomworks](https://github.com/RosettaCommons/atomworks) and
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[foundry](https://github.com/RosettaCommons/foundry). More MPNN
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models and weights will be added to foundry in the future.
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Are we missing a model you would like to work with? Create a PR with the
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necessary files and/or code changes or open an issue requesting it.
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