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<title>fpocket: s_tparams Struct Reference</title>
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<h1>s_tparams Struct Reference</h1><!-- doxytag: class="s_tparams" --><code>#include &lt;<a class="el" href="tparams_8h-source.html">tparams.h</a>&gt;</code>
<p>
<table border="0" cellpadding="0" cellspacing="0">
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<tr><td colspan="2"><br><h2>Data Fields</h2></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">char **&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structs__tparams.html#c04974099c0ce34a0c8a4df7c91f3f43">fapo</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">char **&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structs__tparams.html#02f5ffbfc8da616c952b154ad889e91a">fcomplex</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">char **&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structs__tparams.html#e613f8bd5bff9e433a427643c0127a0a">fligan</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">char *&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structs__tparams.html#d6498c7e5aab53c03e2e6e28ab20cf5b">p_output</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">char *&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structs__tparams.html#bb1ee051c4e5c66e60d68d2087b3b1ef">g_output</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">char&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structs__tparams.html#9bc21733d05a1788c9f04c65163f69c4">stats_g</a> [128]</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">char&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structs__tparams.html#e76497a471fac3d9096bd3503ace1d7f">stats_p</a> [128]</td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">float&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structs__tparams.html#8840a7b94880d24174804b3c566e593d">lig_neigh_dist</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">int&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structs__tparams.html#143ed7e330d24052d70eb0bdd4852f56">nfiles</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top">int&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structs__tparams.html#bba73c22e1d59615c2e25e27d8f99543">keep_fpout</a></td></tr>
<tr><td class="memItemLeft" nowrap align="right" valign="top"><a class="el" href="structs__fparams.html">s_fparams</a> *&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="structs__tparams.html#b6b1c97feba279871d8135b46d53d457">fpar</a></td></tr>
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<hr><a name="_details"></a><h2>Detailed Description</h2>
Container of the tpocket parameters
<p>Definition at line <a class="el" href="tparams_8h-source.html#l00097">97</a> of file <a class="el" href="tparams_8h-source.html">tparams.h</a>.</p>
<hr><h2>Field Documentation</h2>
<a class="anchor" name="c04974099c0ce34a0c8a4df7c91f3f43"></a><!-- doxytag: member="s_tparams::fapo" ref="c04974099c0ce34a0c8a4df7c91f3f43" args="" -->
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<td class="memname">char** <a class="el" href="structs__tparams.html#c04974099c0ce34a0c8a4df7c91f3f43">s_tparams::fapo</a> </td>
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<p>
path to the apo structure
<p>Definition at line <a class="el" href="tparams_8h-source.html#l00099">99</a> of file <a class="el" href="tparams_8h-source.html">tparams.h</a>.</p>
<p>Referenced by <a class="el" href="tparams_8c-source.html#l00306">add_prot()</a>, <a class="el" href="tparams_8c-source.html#l00397">free_tparams()</a>, <a class="el" href="tpocket_8c-source.html#l00556">get_actual_pocket()</a>, <a class="el" href="tparams_8c-source.html#l00075">init_def_tparams()</a>, <a class="el" href="tparams_8c-source.html#l00458">print_params()</a>, <a class="el" href="tpocket_8c-source.html#l00082">test_fpocket()</a>, and <a class="el" href="tpocket_8c-source.html#l00440">test_set()</a>.</p>
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<a class="anchor" name="02f5ffbfc8da616c952b154ad889e91a"></a><!-- doxytag: member="s_tparams::fcomplex" ref="02f5ffbfc8da616c952b154ad889e91a" args="" -->
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<td class="memname">char ** <a class="el" href="structs__tparams.html#02f5ffbfc8da616c952b154ad889e91a">s_tparams::fcomplex</a> </td>
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<p>
path to the holo structure
<p>Definition at line <a class="el" href="tparams_8h-source.html#l00099">99</a> of file <a class="el" href="tparams_8h-source.html">tparams.h</a>.</p>
<p>Referenced by <a class="el" href="tparams_8c-source.html#l00306">add_prot()</a>, <a class="el" href="tparams_8c-source.html#l00397">free_tparams()</a>, <a class="el" href="tpocket_8c-source.html#l00556">get_actual_pocket()</a>, <a class="el" href="tparams_8c-source.html#l00075">init_def_tparams()</a>, <a class="el" href="tparams_8c-source.html#l00458">print_params()</a>, <a class="el" href="tpocket_8c-source.html#l00082">test_fpocket()</a>, and <a class="el" href="tpocket_8c-source.html#l00440">test_set()</a>.</p>
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<a class="anchor" name="e613f8bd5bff9e433a427643c0127a0a"></a><!-- doxytag: member="s_tparams::fligan" ref="e613f8bd5bff9e433a427643c0127a0a" args="" -->
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<td class="memname">char ** <a class="el" href="structs__tparams.html#e613f8bd5bff9e433a427643c0127a0a">s_tparams::fligan</a> </td>
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<p>
name of the ligand residue
<p>Definition at line <a class="el" href="tparams_8h-source.html#l00099">99</a> of file <a class="el" href="tparams_8h-source.html">tparams.h</a>.</p>
<p>Referenced by <a class="el" href="tparams_8c-source.html#l00306">add_prot()</a>, <a class="el" href="tparams_8c-source.html#l00397">free_tparams()</a>, <a class="el" href="tpocket_8c-source.html#l00556">get_actual_pocket()</a>, <a class="el" href="tparams_8c-source.html#l00075">init_def_tparams()</a>, <a class="el" href="tparams_8c-source.html#l00458">print_params()</a>, <a class="el" href="tpocket_8c-source.html#l00082">test_fpocket()</a>, and <a class="el" href="tpocket_8c-source.html#l00440">test_set()</a>.</p>
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<a class="anchor" name="d6498c7e5aab53c03e2e6e28ab20cf5b"></a><!-- doxytag: member="s_tparams::p_output" ref="d6498c7e5aab53c03e2e6e28ab20cf5b" args="" -->
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<td class="memname">char* <a class="el" href="structs__tparams.html#d6498c7e5aab53c03e2e6e28ab20cf5b">s_tparams::p_output</a> </td>
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<p>
per pocket output path
<p>Definition at line <a class="el" href="tparams_8h-source.html#l00103">103</a> of file <a class="el" href="tparams_8h-source.html">tparams.h</a>.</p>
<p>Referenced by <a class="el" href="tparams_8c-source.html#l00108">get_tpocket_args()</a>, <a class="el" href="tparams_8c-source.html#l00075">init_def_tparams()</a>, and <a class="el" href="tpocket_8c-source.html#l00082">test_fpocket()</a>.</p>
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<a class="anchor" name="bb1ee051c4e5c66e60d68d2087b3b1ef"></a><!-- doxytag: member="s_tparams::g_output" ref="bb1ee051c4e5c66e60d68d2087b3b1ef" args="" -->
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<td class="memname">char* <a class="el" href="structs__tparams.html#bb1ee051c4e5c66e60d68d2087b3b1ef">s_tparams::g_output</a> </td>
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<p>
general output path
<p>Definition at line <a class="el" href="tparams_8h-source.html#l00104">104</a> of file <a class="el" href="tparams_8h-source.html">tparams.h</a>.</p>
<p>Referenced by <a class="el" href="tparams_8c-source.html#l00108">get_tpocket_args()</a>, <a class="el" href="tparams_8c-source.html#l00075">init_def_tparams()</a>, and <a class="el" href="tpocket_8c-source.html#l00082">test_fpocket()</a>.</p>
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<a class="anchor" name="9bc21733d05a1788c9f04c65163f69c4"></a><!-- doxytag: member="s_tparams::stats_g" ref="9bc21733d05a1788c9f04c65163f69c4" args="[128]" -->
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<td class="memname">char <a class="el" href="structs__tparams.html#9bc21733d05a1788c9f04c65163f69c4">s_tparams::stats_g</a>[128] </td>
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<p>Definition at line <a class="el" href="tparams_8h-source.html#l00106">106</a> of file <a class="el" href="tparams_8h-source.html">tparams.h</a>.</p>
<p>Referenced by <a class="el" href="tparams_8c-source.html#l00108">get_tpocket_args()</a>.</p>
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<a class="anchor" name="e76497a471fac3d9096bd3503ace1d7f"></a><!-- doxytag: member="s_tparams::stats_p" ref="e76497a471fac3d9096bd3503ace1d7f" args="[128]" -->
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<td class="memname">char <a class="el" href="structs__tparams.html#e76497a471fac3d9096bd3503ace1d7f">s_tparams::stats_p</a>[128] </td>
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<p>
<p>Definition at line <a class="el" href="tparams_8h-source.html#l00107">107</a> of file <a class="el" href="tparams_8h-source.html">tparams.h</a>.</p>
<p>Referenced by <a class="el" href="tparams_8c-source.html#l00108">get_tpocket_args()</a>.</p>
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<a class="anchor" name="8840a7b94880d24174804b3c566e593d"></a><!-- doxytag: member="s_tparams::lig_neigh_dist" ref="8840a7b94880d24174804b3c566e593d" args="" -->
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<td class="memname">float <a class="el" href="structs__tparams.html#8840a7b94880d24174804b3c566e593d">s_tparams::lig_neigh_dist</a> </td>
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<p>
ligand neighbour dist for explicit pocket definition
<p>Definition at line <a class="el" href="tparams_8h-source.html#l00109">109</a> of file <a class="el" href="tparams_8h-source.html">tparams.h</a>.</p>
<p>Referenced by <a class="el" href="tparams_8c-source.html#l00075">init_def_tparams()</a>, and <a class="el" href="tparams_8c-source.html#l00370">parse_lig_neigh_dist()</a>.</p>
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<a class="anchor" name="143ed7e330d24052d70eb0bdd4852f56"></a><!-- doxytag: member="s_tparams::nfiles" ref="143ed7e330d24052d70eb0bdd4852f56" args="" -->
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<td class="memname">int <a class="el" href="structs__tparams.html#143ed7e330d24052d70eb0bdd4852f56">s_tparams::nfiles</a> </td>
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<p>
number of files to analyze
<p>Definition at line <a class="el" href="tparams_8h-source.html#l00110">110</a> of file <a class="el" href="tparams_8h-source.html">tparams.h</a>.</p>
<p>Referenced by <a class="el" href="tparams_8c-source.html#l00243">add_list_data()</a>, <a class="el" href="tparams_8c-source.html#l00306">add_prot()</a>, <a class="el" href="tparams_8c-source.html#l00075">init_def_tparams()</a>, <a class="el" href="tpmain_8c-source.html#l00063">main()</a>, <a class="el" href="tparams_8c-source.html#l00458">print_params()</a>, and <a class="el" href="tpocket_8c-source.html#l00082">test_fpocket()</a>.</p>
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<a class="anchor" name="bba73c22e1d59615c2e25e27d8f99543"></a><!-- doxytag: member="s_tparams::keep_fpout" ref="bba73c22e1d59615c2e25e27d8f99543" args="" -->
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<td class="memname">int <a class="el" href="structs__tparams.html#bba73c22e1d59615c2e25e27d8f99543">s_tparams::keep_fpout</a> </td>
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<p>
keep the fpocket output (flag)
<p>Definition at line <a class="el" href="tparams_8h-source.html#l00111">111</a> of file <a class="el" href="tparams_8h-source.html">tparams.h</a>.</p>
<p>Referenced by <a class="el" href="tparams_8c-source.html#l00108">get_tpocket_args()</a>, <a class="el" href="tparams_8c-source.html#l00075">init_def_tparams()</a>, and <a class="el" href="tpocket_8c-source.html#l00440">test_set()</a>.</p>
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<a class="anchor" name="b6b1c97feba279871d8135b46d53d457"></a><!-- doxytag: member="s_tparams::fpar" ref="b6b1c97feba279871d8135b46d53d457" args="" -->
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<td class="memname"><a class="el" href="structs__fparams.html">s_fparams</a>* <a class="el" href="structs__tparams.html#b6b1c97feba279871d8135b46d53d457">s_tparams::fpar</a> </td>
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<p>
fpocket parameter container
<p>Definition at line <a class="el" href="tparams_8h-source.html#l00115">115</a> of file <a class="el" href="tparams_8h-source.html">tparams.h</a>.</p>
<p>Referenced by <a class="el" href="tparams_8c-source.html#l00397">free_tparams()</a>, <a class="el" href="tpocket_8c-source.html#l00556">get_actual_pocket()</a>, <a class="el" href="tparams_8c-source.html#l00108">get_tpocket_args()</a>, <a class="el" href="tparams_8c-source.html#l00458">print_params()</a>, <a class="el" href="tpocket_8c-source.html#l00082">test_fpocket()</a>, and <a class="el" href="tpocket_8c-source.html#l00440">test_set()</a>.</p>
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<hr>The documentation for this struct was generated from the following file:<ul>
<li><a class="el" href="tparams_8h-source.html">tparams.h</a></ul>
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<hr size="1"><address style="text-align: right;"><small>Generated on Mon Jun 7 16:44:23 2010 for fpocket by&nbsp;
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