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Author	SHA1	Message	Date
Maarten L. Hekkelman	3c241048a5	do not install pcre	2025-08-20 17:02:40 +02:00
Maarten L. Hekkelman	2788536799	this should work	2025-08-20 16:58:52 +02:00
Maarten L. Hekkelman	314d435a18	Another way of importing pcre	2025-08-20 16:49:12 +02:00
Maarten L. Hekkelman	37edcd8666	Finding and optionally building pcre	2025-08-20 15:47:49 +02:00
Maarten L. Hekkelman	10e290fbdf	pcre2 in github actions?	2025-08-20 14:40:50 +02:00
Maarten L. Hekkelman	58cda1241e	cleanup	2025-08-20 13:41:45 +02:00
Maarten L. Hekkelman	3659aaabff	remove unneeded allocations	2025-08-20 13:35:15 +02:00
Maarten L. Hekkelman	727a39cc54	Finishing up replacing boost with pcre	2025-08-20 13:28:24 +02:00
Maarten L. Hekkelman	fd9ccdfff9	Using pcre instead of boost::regex	2025-08-19 16:16:43 +02:00
Maarten L. Hekkelman	aabee270b3	update .gitignore	2025-08-19 14:28:51 +02:00
Maarten L. Hekkelman	647c58f8ec	allow code to be built with older compilers...	2025-08-19 12:44:41 +02:00
Maarten L. Hekkelman	0b8024d19c	Optimise query processing	2025-08-19 12:24:33 +02:00
Maarten L. Hekkelman	d59b0bf27f	Remove wrong warnings	2025-08-13 11:30:53 +02:00
Maarten L. Hekkelman	398c16eac2	Merge branch 'develop' of github.com:PDB-REDO/libcifpp into develop	2025-08-13 09:02:10 +02:00
Maarten L. Hekkelman	fa869bdc7d	lightweight fixup	2025-08-13 09:01:50 +02:00
Maarten L. Hekkelman	c20d0d2a30	lightweight fixup	2025-08-12 16:45:19 +02:00
Maarten L. Hekkelman	000f2736c2	Merge branch 'develop' into clebreto-feature/enrich_structure_options	2025-08-11 10:13:20 +02:00
Maarten L. Hekkelman	cfcc81bb62	verbose messages	2025-08-11 10:13:07 +02:00
Maarten L. Hekkelman	82eae05868	changed b-factor options for structure loading	2025-06-11 14:17:50 +02:00
Maarten L. Hekkelman	e8fb53c49b	Alternate implementation of structure_open_options	2025-06-11 13:35:58 +02:00
Maarten L. Hekkelman	604c97afe1	Merge branch 'develop' into clebreto-feature/enrich_structure_options	2025-06-11 11:43:01 +02:00
Maarten L. Hekkelman	7e60cdf272	remove redundant statement	2025-06-11 11:42:26 +02:00
Maarten L. Hekkelman	9ea7cfcc80	Remove test	2025-06-11 09:56:26 +02:00
Maarten L. Hekkelman	a7a4a16f79	remove debug code	2025-06-11 09:45:45 +02:00
Maarten L. Hekkelman	6717059934	Revert renaming compound_id to mon_id in residue	2025-06-11 09:41:49 +02:00
Maarten L. Hekkelman	714747c280	version bump	2025-06-11 09:32:36 +02:00
Maarten L. Hekkelman	81cd305c80	rename mm::polymer fields and methods to better match mmcif_pdbx naming. ... fix building mm::structure using pdb_seq_num instead of auth_seq_num	2025-06-11 09:30:54 +02:00
Maarten L. Hekkelman	5de872bbb3	Version bump, update mmcif_pdbx.dic	2025-06-10 09:17:30 +02:00
Maarten L. Hekkelman	ce6a75a920	right...	2025-06-10 09:11:26 +02:00
Maarten L. Hekkelman	874a5cb2f2	missing code added	2025-06-02 15:09:49 +02:00
Maarten L. Hekkelman	6e2202d4f1	More verbose strip	2025-06-02 09:10:58 +02:00
Maarten L. Hekkelman	bcf33df701	Added strip, removed dangerous datablock::is_valid (non-const version)	2025-06-02 08:52:58 +02:00
Maarten L. Hekkelman	3bdcf21c69	Merge commit '4b36bdc' into develop	2025-05-29 16:14:15 +02:00
Maarten L. Hekkelman	4b36bdc58c	work around incorrect mmcif_pdbx name	2025-05-29 16:13:28 +02:00
Maarten L. Hekkelman	6d9008ee8c	Merge branch 'trunk' into develop	2025-05-29 15:15:41 +02:00
Maarten L. Hekkelman	ee93692707	comment formatting	2025-05-29 14:15:13 +02:00
Maarten L. Hekkelman	2bcc368bce	reconstruct when audit_conform is missing	2025-05-29 14:07:45 +02:00
Maarten L. Hekkelman	6cc4467d53	options	2025-05-27 13:55:13 +02:00
Maarten L. Hekkelman	425f98dc07	No longer fail pdb conversion when missing compound info v8.0.1	2025-05-12 12:45:21 +02:00
Maarten L. Hekkelman	cf34a9f3ad	Updated test file	2025-05-12 11:56:42 +02:00
Maarten L. Hekkelman	3b2f347428	Remove reconstruct test again	2025-05-12 11:46:16 +02:00
Maarten L. Hekkelman	bd82c3cc4f	Only reconstruct when needed	2025-05-12 10:24:00 +02:00
Maarten L. Hekkelman	af319866c7	added get_atom_by_atom_id	2025-05-06 14:11:05 +02:00
Maarten L. Hekkelman	b6ab29398e	Fix parsing PDB files	2025-04-15 09:56:51 +02:00
Maarten L. Hekkelman	a5bb1797c0	Merge branch 'trunk' of github.com:PDB-REDO/libcifpp into trunk	2025-04-15 09:17:44 +02:00
Maarten L. Hekkelman	a9647671c4	entity_poly.type is now by default 'other'	2025-04-15 09:17:37 +02:00
Maarten L. Hekkelman	63f784e7da	Reconstruct branches, somewhat	2025-04-14 12:44:27 +02:00
Maarten L. Hekkelman	5da3379e0b	Don't reconstruct invalid files, non-polymer should not have auth_seq_id	2025-04-14 11:06:36 +02:00
Maarten L. Hekkelman	2f3514689d	Default value for b_iso_or_equiv, better sorting of atoms	2025-04-09 15:12:11 +02:00
Maarten L. Hekkelman	89a3ea4e24	update mmcif_pdbx.dic	2025-04-09 15:11:37 +02:00