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https://github.com/PDB-REDO/libcifpp.git
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93375a5087
* - renamed exists to contains - fix compare for ints where item is empty * - checking and optionally dropping ndb_poly_seq_scheme - fix in iterator_proxy * formatting data in reconstruction * Version bump * Attempt to get code compiling on macOS * attempt 2 to build on macOS * Added remove column * Added rename_column Added item_alias Rename columns in reconstruct * macOS... * Fixed serious bug in emplace of both datablock and file. * renaming field and column to item * replace tag with item or item_name * Fix validate pdbx * version bump * atom_site_anisotrop check * - changed compound::is_known_peptide/is_know_base - Add audit_conform only if file is really valid - Added reconstruction code for PDBx * pdb2cif work * gcc diagnostics and clipper * Fixing pdb2cif, and sequence checking * work around bug in old gcc * fix reconstruct sequence * formatting * some small optimisations * Fix url in compound message * Fix operator= for item_handle * Fix operator= for item_handle * new update_value in category * test builds faster now * Use Catch2 version 3 if installed * catch22
44 lines
1.5 KiB
C++
44 lines
1.5 KiB
C++
#define CATCH_CONFIG_RUNNER 1
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#include "test-main.hpp"
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#include <cif++.hpp>
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std::filesystem::path gTestDir = std::filesystem::current_path();
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int main(int argc, char *argv[])
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{
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Catch::Session session; // There must be exactly one instance
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// Build a new parser on top of Catch2's
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#if CATCH22
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using namespace Catch::clara;
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#else
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// Build a new parser on top of Catch2's
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using namespace Catch::Clara;
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#endif
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auto cli = session.cli() // Get Catch2's command line parser
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| Opt(gTestDir, "data-dir") // bind variable to a new option, with a hint string
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["-D"]["--data-dir"] // the option names it will respond to
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("The directory containing the data files") // description string for the help output
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| Opt(cif::VERBOSE, "verbose")["-v"]["--cif-verbose"]("Flag for cif::VERBOSE");
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// Now pass the new composite back to Catch2 so it uses that
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session.cli(cli);
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// Let Catch2 (using Clara) parse the command line
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int returnCode = session.applyCommandLine(argc, argv);
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if (returnCode != 0) // Indicates a command line error
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return returnCode;
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// do this now, avoids the need for installing
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cif::add_file_resource("mmcif_pdbx.dic", gTestDir / ".." / "rsrc" / "mmcif_pdbx.dic");
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// initialize CCD location
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cif::add_file_resource("components.cif", gTestDir / ".." / "rsrc" / "ccd-subset.cif");
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cif::compound_factory::instance().push_dictionary(gTestDir / "HEM.cif");
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return session.run();
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} |