midlik
32c3ef0801
MVS: OpenApi schema in docs ( #1051 )
2024-02-19 18:04:06 +01:00
midlik
46af7d03bf
MVSX ( #1041 )
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* MVSX format provider
* MVS: Integration examples
* MVS: drag-and-drop support for MVSX
* MVS: support for URL param mvs-format=mvsx
* MVS: docs for MVSX
* MVS: mvs-render supports MVSX
* Update README
2024-02-14 18:22:27 +01:00
midlik
f8bda3617f
Mvs extension - yet another pull request ( #1002 )
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* MVS extension: support all X11 colors
* MVS extension: nicer validation messages for literal types
* MVS extension: no need to call HexColor in builder
* MVS extension: Support relative URIs
* MVS extension: docs
* MVS extension: docs - fix markdown
* MVS extension: docs
* MVS extension: docs for selectors
* MVS extension: docs for selectors
* Support for label rendering in HeadlessPluginContext
* MVS extension: CLI utils
* MVS extension: nicer component node labels
* MVS extension: labels applied in one node
* MVS extension: labels applied in one node - fixed label colors
* MVS extensions: removed unused params from "Custom Label"
---------
Co-authored-by: David Sehnal <dsehnal@users.noreply.github.com >
2023-12-21 11:58:10 +01:00
midlik
c592a3b93d
MVS extension - additional work ( #991 )
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* MVS extension: deterministic transform refs, updated metadata structure
* Perf-test for `sortIfNeeded`
* MVS extension: README
* MVS extension: show loading errors in the Mol* console
* MVS extension: auto-fix rotation matrix imprecisions
* MVS extension: data format provider
* MVS extension: Updated README
* MVS extension: rename deletePrevious -> replaceExisting, default to false in "Load MVS Data" to allow loading multiple files
* Perf-test for sortIfNeeded uses Benchmark.js
2023-11-29 17:21:02 +01:00
midlik
b7b52f5c7d
MVS extension ( #976 )
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* Moved MVS extension from mol-view-spec repo
* Viewer supports URL params mvs-url, mvs-data, mvs-format
* Tests
* MVS sanity checks
* MVS extension: drag-and-drop support
* mvs-render try1
* Example CLI utility mvs-render
* Example CLI utility mvs-validate
* MVS extension: renaming
* MVS extension: fixed FOV in mvs-render
* Moved stuff to mol-util/array.ts
* Moved stuff to mol-util/object.ts
* MVS extension: renamed `additions` to `components`
* MVS extension: trying plugin.managers.camera.focusSphere
* MVS extension: refactor focus
* MVS extension: fixed label color once again
* MVS extension: camera position adjustment (compensate FOV differences)
* Fixed formula for camera focus in orthographic mode
* Moved Choice to mol-util/param-choice.ts
* Moved stuff to mol-util/json.ts
* Object.hasOwn polyfill
* MVS extension: small refactor
* Fixed bug in hashString
2023-11-24 14:38:08 +01:00
valasatava
649e779100
Add HYP to the list of amino acids ( #815 )
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* add modified amino acid "hydroxyproline" (HYP) present in collagen molecules to the list of amino acids
* update changelog
2023-05-09 16:27:42 +02:00
midlik
315401c166
struct-conn extension ( #802 )
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* struct-conn extension toy example
* Minor changes (David's feedback)
* Showing struct_conn visuals
* Removed Interactions visual
* Caching struct_conns
* Removed testing buttons in index.html, updated CHANGELOG
* Addressed most of PR feedback
* Fixed structure node selection, docs
* Addressed feedback round 2
2023-05-03 18:01:51 +02:00
Alexander Rose
a7ef0fb85f
add interesting pdb entry
2022-05-05 22:41:16 -07:00
Alexander Rose
0df3bcd65d
document supported file formats
2022-04-19 17:43:33 -07:00
Alexander Rose
90ad32d936
add ring example PDB IDs
2022-02-21 13:48:43 -08:00
Alexander Rose
ce1e3960a2
avoid standard polymers misqualified as ligands
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- overrule erroneous chem comp type in some files
2021-12-18 12:13:36 -08:00
Alexander Rose
70fa85d7d4
fix assembly-symmetry off option
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- would not remove cage/axes visuals
2021-05-28 23:04:08 -07:00
Alexander Rose
a2b4ed7c1c
queries: add nos-bridge, improve disulfide-bridge
2021-05-09 13:56:40 -07:00
Alexander Rose
0bb376706d
fix ellipsoid repr and support includeParent
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- switch off adjustCylinderLength
- handle structure with child
2021-03-20 23:58:48 -07:00
Alexander Rose
2e561a8de7
added interesting pdb entry
2021-02-27 18:25:34 -08:00
Alexander Rose
7015309db6
added more interesting pdb entries
2021-01-16 11:37:48 -08:00
David Sehnal
89eae0807e
docs fix
2020-07-06 15:13:13 +02:00
Alexander Rose
aa2899bfbd
fix sequence label for non-standard residues, #70
2020-06-21 18:54:10 -07:00
Alexander Rose
3a737099ad
add micro het todos and example pdb id
2020-06-01 17:49:47 -07:00
David Sehnal
422f4567f1
full commonjs build for servers and cli tools
2020-05-27 20:37:12 +02:00
Alexander Rose
2797b451fb
add interesting pdb entries info
2020-05-22 17:10:03 -07:00
David Sehnal
e78cf18a38
separate build for servers
...
- because of problems with ES6 modules (might revert later)
+ css tweaks
2020-04-15 01:40:52 +02:00
David Sehnal
8f211a0785
servers readme tweak
2020-03-17 15:50:05 +01:00
David Sehnal
94adf7259d
model and volume server configuration and docs
2020-03-17 14:46:28 +01:00
Alexander Rose
8603ef1a9b
renamed project from molstar-proto to molstar
2019-06-03 15:04:15 -07:00
David Sehnal
c03a35ae9b
state docs
2019-02-18 16:28:40 +01:00
Alexander Rose
62fda3e3e6
transformer docs tweaks
2019-02-11 10:30:28 -08:00
David Sehnal
ebaf0a2035
basic plugin state docs
2019-02-10 21:03:21 +01:00
David Sehnal
917fc2e14c
auto-generate transformer docs
2019-02-09 20:38:19 +01:00
David Sehnal
07ee6646a1
model-server docs tweak
2018-10-11 14:43:54 +02:00
David Sehnal
5c9065469b
model-server: basic documentation
2018-10-03 14:06:04 +02:00
David Sehnal
88c9248c3f
Added VolumeServer
2018-05-22 17:45:15 +02:00
David Sehnal
6d59213c9d
Tweaks
2017-11-02 20:12:53 +01:00
David Sehnal
23ebae54ae
Naming CIF things
2017-10-16 01:11:26 +02:00
David Sehnal
28b55d95e5
cif schema docs tweaks
2017-10-14 15:10:19 +02:00
David Sehnal
050edf26e1
tweaked docs
2017-10-14 10:57:43 +02:00
David Sehnal
c2a140b7a2
docs about how CIF schemas work
2017-10-14 10:40:26 +02:00
