mirror of
https://github.com/molstar/molstar.git
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* move schema based element addressing from MVS to the core library * proof of concept * tweak * initial visual * tweak * tweak structureElementLocationToSchemaItem * show receptor residues as ball and stick * wip data model * custom interactions support * add example * wip visuals * covalent links * tweak * fix bug * cache unit features * Add structureRef to Molecule.Structure.Selections * optimize compute * support multi-structure selections * analyzeTrajectory support * readme * tweak * headers * docs * Optimize StructureElementSchema & remove fromLoci conversion (not production ready for now, will be separate PR) * move schema code to `StructureElement.Schema` and add fromExpression/Query/Schame functions to Loci and Bundle * improve selection docs * adjust covalent bond data model * tweak fromExpression * fix type * remove hydrogen reference * Fix MVS.rowsToExpression
64 lines
2.1 KiB
YAML
64 lines
2.1 KiB
YAML
site_name: Mol* Developer Documentation
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theme:
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name: material
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# 404 page
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static_templates:
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- 404.html
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# Necessary for search to work properly
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include_search_page: false
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search_index_only: true
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# Default values, taken from mkdocs_theme.yml
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language: en
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font:
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text: Roboto
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code: Roboto Mono
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favicon: assets/favicon.png
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icon:
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logo: logo
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markdown_extensions:
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- pymdownx.highlight
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- pymdownx.superfences
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- pymdownx.arithmatex:
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generic: true
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# Scripts for rendering Latex equations (in addition to pymdownx.arithmatex):
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extra_javascript:
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- https://polyfill.io/v3/polyfill.min.js?features=es6
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- https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js
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nav:
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- 'index.md'
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- Plugin:
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- Creating Instance: 'plugin/instance.md'
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- Examples: plugin/examples.md
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- Custom Library: 'plugin/custom-library.md'
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- Selections: 'plugin/selections.md'
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- Viewer State: 'plugin/viewer-state.md'
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- Data State: 'plugin/data-state.md'
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- File Formats: 'plugin/file-formats.md'
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- CIF Schemas: 'plugin/cif-schemas.md'
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- State Transforms:
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- Custom Trajectory: 'plugin/transforms/custom-trajectory.md'
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- Custom Conformation: 'plugin/transforms/custom-conformation.md'
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- Data Access Tools:
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- 'data-access-tools/model-server.md'
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- Volume Server:
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- Overview: 'data-access-tools/volume-server/index.md'
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- Examples: 'data-access-tools/volume-server/examples.md'
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- How it Works: 'data-access-tools/volume-server/how-it-works.md'
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- Data Format: 'data-access-tools/volume-server/response-data-format.md'
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- 'data-access-tools/plugin-state-server.md'
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- 'data-access-tools/convert-to-bcif.md'
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- 'data-access-tools/create-ccd-table.md'
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- 'data-access-tools/extract-ccd-ions.md'
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- Extensions:
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- MolViewSpec: 'extensions/mvs/index.md'
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- wwPDB StructConn: 'extensions/struct-conn.md'
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- Tunnels: 'extensions/tunnels.md'
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- Interactions: 'extensions/interactions.md'
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- Misc:
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- Interesting PDB entries: misc/interesting-pdb-entries.md
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- Exporting component data: exporting-components.md
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repo_url: https://github.com/molstar/docs
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