15 Commits

Author	SHA1	Message	Date
Alyssa Travitz	31bb2a777d	make gufe lowercase in docs (#1190) ... * make gufe lowercase in docs * Update docs/reference/index.rst Co-authored-by: Mike Henry <11765982+mikemhenry@users.noreply.github.com> * Update docs/reference/api/index.rst Co-authored-by: Mike Henry <11765982+mikemhenry@users.noreply.github.com> --------- Co-authored-by: Mike Henry <11765982+mikemhenry@users.noreply.github.com>	2025-03-14 09:55:24 -07:00
Mike Henry	e6b3d61a7c	add notes from review and do 1 sentence = 1 line	2024-04-18 02:41:51 -07:00
Richard Gowers	d316c52139	Update index.rst	2024-04-18 09:44:30 +01:00
Mike Henry	b562b2c57f	added note about the GUFE package	2024-04-17 10:25:47 -07:00
IAlibay	eb149bb00c	Moving settings around	2024-03-08 17:13:29 +00:00
richard gowers	4a2cf82694	docs: add openmm_md protocol page stub ... split ligand_network page into two first atom mappings and scorers then entire page to ligand networks	2024-02-15 13:10:12 +00:00
richard gowers	da6a1b5423	docs: remove Data Objects reference page ... GufeTokenizable isn't relevant to openfe docs	2024-02-15 13:10:12 +00:00
IAlibay	35b7735859	Add solvation_afe to doc index	2023-10-16 06:55:05 +01:00
Josh Mitchell	5458def7de	Document GufeTokenizable	2023-08-28 18:59:25 +10:00
Josh Mitchell	a53fc782b7	Reorganise API docs	2023-08-22 13:48:16 +10:00
Josh Mitchell	c0d747fdae	Limit reference TOC depth	2023-07-20 18:05:51 +10:00
Josh Mitchell	f79e535175	Autosummary for API reference	2023-07-12 23:37:48 +10:00
richard gowers	ebd1de060d	document execute_DAG and related classes	2023-05-08 11:15:11 +01:00
richard gowers	b819419f65	trying autodoc pydantic	2023-05-03 18:35:18 +01:00
David W.H. Swenson	25a25ab818	DOCS: restructure ref; add scorers to API docs	2023-04-12 11:35:47 +01:00