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71 lines
2.3 KiB
Python
71 lines
2.3 KiB
Python
import pytest
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import click
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from importlib import resources
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import pathlib
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import json
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from click.testing import CliRunner
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from openfecli.commands.quickrun import quickrun
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from gufe.tokenization import JSON_HANDLER
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@pytest.fixture
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def json_file():
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with resources.files('openfecli.tests.data') as d:
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json_file = str(d / 'transformation.json')
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return json_file
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@pytest.mark.parametrize('extra_args', [
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{},
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{'-d': 'foo_dir', '-o': 'foo.json'}
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])
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def test_quickrun(extra_args, json_file):
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extras = sum([list(kv) for kv in extra_args.items()], [])
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runner = CliRunner()
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with runner.isolated_filesystem():
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result = runner.invoke(quickrun, [json_file] + extras)
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assert result.exit_code == 0
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assert "Here is the result" in result.output
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if outfile := extra_args.get('-o'):
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assert pathlib.Path(outfile).exists()
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with open(outfile, mode='r') as outf:
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dct = json.load(outf, cls=JSON_HANDLER.decoder)
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assert set(dct) == {'estimate', 'uncertainty',
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'protocol_result', 'unit_results'}
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# TODO: need a protocol that drops files to actually do this!
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# if directory := extra_args.get('-d'):
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# dirpath = pathlib.Path(directory)
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# assert dirpath.exists()
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# assert dirpath.is_dir()
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# assert len(list(dirpath.iterdir())) > 0
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def test_quickrun_output_file_exists(json_file):
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runner = CliRunner()
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with runner.isolated_filesystem():
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pathlib.Path('foo.json').touch()
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result = runner.invoke(quickrun, [json_file, '-o', 'foo.json'])
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assert result.exit_code == 2 # usage error
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assert "File 'foo.json' already exists." in result.output
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def test_quickrun_unit_error():
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with resources.files('openfecli.tests.data') as d:
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json_file = str(d / 'bad_transformation.json')
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runner = CliRunner()
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with runner.isolated_filesystem():
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result = runner.invoke(quickrun, [json_file, '-o', 'foo.json'])
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assert result.exit_code == 1
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assert pathlib.Path("foo.json").exists()
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# TODO: I'm still not happy with this... failure result does not see
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# to be stored in JSON
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# not sure whether that means we should always be storing all
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# protocol dag results maybe?
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