Jennifer 0fe5ea3168 Add fixes to permutation test after refactor

2024-02-07 01:03:40 -05:00

..

test_data

update train_mmcifs_cache so that now only use one structure for testing

2023-08-03 14:23:52 +02:00

__init__.py

Initial commit

2021-09-17 18:34:59 -04:00

compare_utils.py

Adds absolute error comparison function with better messaging.

2024-02-01 22:53:12 -05:00

config.py

create separate test configs for multimer and monomer

2024-02-07 00:07:29 -05:00

data_utils.py

Merge branch 'main' into multimer

2023-12-11 10:48:16 -05:00

test_data_pipeline.py

All non-cuda tests passing for monomer/multimer. Tri mul/attn and OPM order switched.

2023-02-17 00:59:28 -05:00

test_data_transforms.py

Merging in main branch

2023-04-09 11:07:04 -04:00

test_deepspeed_evo_attention.py

fix deepspeed_evo_attention to work in both monomer and multimer settings.

2024-02-07 00:07:58 -05:00

test_embedders.py

Merge branch 'main' into multimer

2023-10-27 12:09:39 -04:00

test_evoformer.py

Adds absolute error comparison function with better messaging.

2024-02-01 22:53:12 -05:00

test_feats.py

Adds absolute error comparison function with better messaging.

2024-02-01 22:53:12 -05:00

test_import_weights.py

Fix for loading old OF weights into refactored model

2023-11-03 14:26:18 -04:00

test_kernels.py

Add memory-efficient attention kernels

2022-04-26 02:11:18 -04:00

test_loss.py

Unit test fixes for when AF2 is not installed

2023-11-02 15:57:23 -04:00

test_model.py

Additional fix for multimer deepspeed test

2024-01-23 12:17:40 -05:00

test_msa.py

Adds absolute error comparison function with better messaging.

2024-02-01 22:53:12 -05:00

test_multimer_datamodule.py

Unit test fixes for when AF2 is not installed

2023-11-02 15:57:23 -04:00

test_outer_product_mean.py

Adds absolute error comparison function with better messaging.

2024-02-01 22:53:12 -05:00

test_pair_transition.py

update deprecated jax.numpy.DeviceArray to jax.Array

2024-02-01 22:53:12 -05:00

test_permutation.py

Add fixes to permutation test after refactor

2024-02-07 01:03:40 -05:00

test_primitives.py

Merge branch 'main' into multimer

2023-12-11 10:48:16 -05:00

test_structure_module.py

Adds absolute error comparison function with better messaging.

2024-02-01 22:53:12 -05:00

test_template.py

Adds absolute error comparison function with better messaging.

2024-02-01 22:53:12 -05:00

test_triangular_attention.py

Adds absolute error comparison function with better messaging.

2024-02-01 22:53:12 -05:00

test_triangular_multiplicative_update.py

Adds absolute error comparison function with better messaging.

2024-02-01 22:53:12 -05:00

test_utils.py

Fix utils tests

2023-06-24 02:36:02 -04:00