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5,127 Commits 10 Branches 6 Tags
cpp11
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32 Commits

Author SHA1 Message Date
Jarrett Johnson
355c45d229 Place CObject in pymol namespace 2021-02-11 19:14:06 +01:00
Jarrett Johnson
465a8bd1d8 ObjectDist refactor backport 2020-10-05 11:46:12 +02:00
Thomas Holder
08c9dff871 PYMOL-3533 Refactor Rep as polymorphic type (2) 
Part 2: virtual member functions
 2020-09-30 09:46:26 +02:00
Thomas Holder
7847fe6014 refactor: C++ify DistSet 2020-02-26 19:08:34 +01:00
Thomas Holder
75f06a974e CObject function pointers -> virtual methods 2019-10-29 16:24:12 +01:00
Jarrett Johnson
00473b5656 C++ inheritance for Object classes 2019-09-04 18:18:01 +02:00
Thomas Holder
5a4ab0eaa9 PYMOL-3272 remove obsolete metaphorics code 
cex files and m4x annotated PDB files don't exist anymore.
cex loading was broken for a long time, proof that nobody was using it.
 2019-08-19 22:07:24 +02:00
Thomas Holder
035d6fe611 C++ inheritance for all CObject subclasses 2019-03-29 13:36:14 +01:00
Thomas Holder
1742d75d13 anaglyph batch mode, all_states measurements, ... 
* fix anaglyph stereo in batch (headless) mode
* fix possible memory corruption with boolean settings
* measurement wizard: distances between states (all_states=on)
* get_fastastr: nucleic acid, by chain
* menu: A (Action) > group
* sequence viewer menu: ss (Secondary Structure)
* MAE export of groups (s_m_subgroupid)
* macOS: -O3 -fno-strict-aliasing (bugs/205)
 2018-05-03 14:46:44 +00:00
Thomas Holder
4dd7c7ffd4 SCALEn, numpy, set_state_order, ... 
* ignore SCALEn if CRYST1 is 1x1x1 or invalid
* new/refactored API functions for accessing coordinates and maps as numpy arrays
* new API function: cmd.set_state_order
* Session file (PSE) support for callback objects
* fix/silence many compiler warnings
* fix bg_rgb_top/bg_rgb_bottom side effects
* revert "fix setting surface_circumscribe"
* delete some obsolete files
 2014-09-17 19:17:56 +00:00
Jason Vertrees
ebaee1f06f changing comment style for builds 2010-12-20 15:50:37 +00:00
Jason Vertrees
b64e5ead48 dynamic measures 2010-10-05 20:45:31 +00:00
Jason Vertrees
ae3f706f51 v1.3 checkin; dynamic_distances, new neighbor finding settings, etc 2010-05-28 22:32:50 +00:00
wdelano
e1510a777a reindent part 2 2009-06-14 22:20:57 +00:00
wdelano
0b2c0c4cc9 2007-05-19 03:18:48 +00:00
wdelano
4dbbb1d8fe *** empty log message *** 2005-12-19 20:57:14 +00:00
wdelano
96d9209af5 *** empty log message *** 2005-12-04 21:42:20 +00:00
wdelano
6c6b3c058c *** empty log message *** 2005-04-26 23:35:01 +00:00
wdelano
6413ea4a67 *** empty log message *** 2005-03-19 04:28:35 +00:00
wdelano
5950e93f86 *** empty log message *** 2005-03-03 03:29:18 +00:00
wdelano
87e5ccc9b4 Eliminating global state...part 1 2004-09-03 21:21:37 +00:00
wdelano
b369dcd73c *** empty log message *** 2004-02-08 01:34:51 +00:00
wdelano
7b7cee5b3e *** empty log message *** 2003-12-20 23:05:36 +00:00
wdelano
0bf9d2dd1e *** empty log message *** 2003-09-29 19:20:06 +00:00
wdelano
a732f5c997 *** empty log message *** 2003-05-29 23:28:23 +00:00
wdelano
8b4db76c82 *** empty log message *** 2003-05-19 17:55:41 +00:00
wdelano
39da0fbad2 *** empty log message *** 2002-11-20 06:32:32 +00:00
wdelano
142b5e86d9 *** empty log message *** 2002-10-30 06:22:02 +00:00
wdelano
6ac0874b10 *** empty log message *** 2002-02-08 10:20:23 +00:00
wdelano
63ae85a8ee *** empty log message *** 2002-02-08 09:54:23 +00:00
wdelano
eada5fff2b params 2001-02-06 07:25:30 +00:00
wdelano
a1b529e661 Added distance objects, dashed lines, etc. 2000-08-07 16:20:32 +00:00