10 Commits

Author SHA1 Message Date
Thomas Holder
60fd0e12c9 Add PWG commands table to documentation 2020-05-15 11:33:28 +02:00
Thomas Holder
cd134ffec5 PYMOL-3325 new PWG "header" command 2019-12-09 17:34:49 +01:00
Thomas Holder
889cbb280f auto library mode
* Python API: New "auto library mode". Automatically start a
  non-GUI PyMOL instance if the pymol.cmd API is used without
  running pymol.launch() first
* pdb_echo_tags for mmCIF and MMTF
* command parser: improve exception handling
* fix some PSE export memory leaks
* pymol2.cmd2: eliminate (non-weak) circular references
* movie making: reinterpolate after add_nutate/add_roll etc.
* support "module:callable" in loadfunctions/safefunctions
* yellow state indicator for discrete objects
* mpng modal draw improvements
2017-12-05 18:37:16 +00:00
Thomas Holder
0629165364 patches/12, bugs/148
- web.pymolhttpd -> pymol.pymolhttpd
  Generic "web" name conflicts with webpy
  https://sf.net/p/pymol/bugs/148/
- make build reproducible
  https://sf.net/p/pymol/patches/12/
- delete obsolete packaging files
- internal command line: consistent behavior across platforms
2017-07-03 13:10:23 +00:00
Thomas Holder
2d45a2d7ca Python 3 compatibility
Tested with Python 2.6, 2.7, 3.4
2015-12-09 17:01:32 +00:00
Thomas Holder
e514db1056 bug fixes, better pre-C++11 support
- fix "File > Open" from drive root on Windows
- std::array replacement for pre-C++11
- define NOMINMAX, fmax -> std::max
- correct setting-level handling in presets
- unset: restore default for string/float3/color, warn for int/bool/float
- fix "Display > Sequence" needs redisplay
- migrate seq_view_label_color=white from old PSE
- remove machine generated code from web/pymolhttpd.py
- fix segfault in read_pdbx_struct_assembly
2015-06-03 15:59:08 +00:00
Thomas Holder
9bb5c2d971 1.7.5.0 (unstable/experimental)
* mmCIF _atom_sites.fract_transf support (SCALEn equivalent)
* Complete port of scenes to C++
* warn user if setting a setting on the wrong level
* cmd.extendaa: shortcut for cmd.extend with argument auto-completion
* reduced memory footprint of AtomInfoType
* expose "reps" to iterate/alter
* expose "protons" to iterate/alter
* adaptive cartoon quality and sampling, depending on number of atoms
* fix ring center color with cartoon_ring_color=default
* make SelectorGetTmp strictly molecular, fixes for example "dss" with group names
* fix "copy" can cause crash
* fix "custom" selection operator
* consider spec_count in shaders
* don't invalidate shaders for lighting settings
* don't disable shaders for all Intel chips
* don't touch sphere_mode when disabling shaders
* map_new buffer == -1 -> gaussian_resolution
* fix all_states picking
* remove cylinder_shader_ff_workaround and cylinders_shader_filter_faces
* remove unused gl_ambient setting
* fix Tcl/Tk menu settings logging
* fix: grid mode scales down label size incorrectly
* fix: no animate argument for cmd.origin
* fix side_chain_helper for hetatm polymer atoms
* fix .mmd export
* refactor many function to take "const" pointer arguments
2015-03-12 17:44:19 +00:00
Jason Vertrees
a5f943ee50 pymol-v1.5.0.1 2012-02-13 19:02:02 +00:00
Jason Vertrees
2b9d727c61 PyMOL v1.4b1 2011-04-01 21:22:09 +00:00
Jason Vertrees
72a64e3672 PyMOL Web Services API and examples 2011-02-03 16:42:29 +00:00