import os from pymol import cmd, testing, stored, headering mtzfiles = [ '/schrodinger/mmshare/mmlibs/mmreflect/10_warpNtrace.mtz', '/schrodinger/tasks/other_maps/ec_1.1.mtz', '/schrodinger/tasks/other_maps/refine.mtz', '/schrodinger/tasks/other_maps/refine_without_eIF1A.mtz', '/schrodinger/tmp/1atx4.mtz', ] class TestHeadering(testing.PyMOLTestCase): def test(self): for filename in mtzfiles: if not os.path.exists(filename): continue header = headering.MTZHeader(filename) self.assertTrue(isinstance(header, headering.MTZHeader)) self.assertTrue(header.datasets) def test2(self): filename = self.datafile('4rwb.mtz') header = headering.MTZHeader(filename) self.assertTrue(isinstance(header, headering.MTZHeader)) ds0 = header.datasets['0'] self.assertEqual(ds0['name'], 'HKL_base') self.assertEqual(ds0['project'], 'HKL_base') self.assertAlmostEqual(float(ds0['alpha']), 90.0) self.assertAlmostEqual(float(ds0['beta']), 95.677) self.assertAlmostEqual(float(ds0['gamma']), 90.0) ds1 = header.datasets['1'] self.assertEqual(ds1['name'], 'data_1') self.assertEqual(ds1['project'], 'sf_convert') self.assertAlmostEqual(float(ds1['x']), 40.93) self.assertAlmostEqual(float(ds1['y']), 41.23) self.assertAlmostEqual(float(ds1['z']), 27.93) self.assertEqual(sorted(header.getColumns()), [ 'HKL_base/HKL_base/H', 'HKL_base/HKL_base/K', 'HKL_base/HKL_base/L', 'cryst_1/data_1/FC', 'cryst_1/data_1/FOM', 'cryst_1/data_1/FP', 'cryst_1/data_1/FREE', 'cryst_1/data_1/PHIC', 'cryst_1/data_1/SIGFP' ]) self.assertEqual(header.getColumnsOfType("W"), ['cryst_1/data_1/FOM'])