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Update DOI resolver [ci skip]
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This directory contains scripts for carrying out the calculations and analyis from the publications:
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1) A. Vulpetti, U. Hommel, G. Landrum, R. Lewis and C. Dalvit, "Design and NMR-based screening of LEF,
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a library of chemical fragments with different Local Environment of Fluorine" J. Am. Chem. Soc. 131 (2009) 12949-12959. http://dx.doi.org/10.1021/ja905207t
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a library of chemical fragments with different Local Environment of Fluorine" J. Am. Chem. Soc. 131 (2009) 12949-12959. https://doi.org/10.1021/ja905207t
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2) A. Vulpetti, G. Landrum, S. Ruedisser, P. Erbel and C. Dalvit, "19F NMR Chemical Shift Prediction with
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Fluorine Fingerprint Descriptor" J. of Fluorine Chemistry (2010). http://dx.doi.org/10.1016/j.jfluchem.2009.12.024
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Fluorine Fingerprint Descriptor" J. of Fluorine Chemistry (2010). https://doi.org/10.1016/j.jfluchem.2009.12.024
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The scripts require that the RDKit (www.rdkit.org) be installed and properly configured.
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@@ -34,8 +34,8 @@ Commands to run:
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In the event you use the scripts for publication please reference the original publications:
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1) A. Vulpetti, U. Hommel, G. Landrum, R. Lewis and C. Dalvit, "Design and NMR-based screening of LEF,
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a library of chemical fragments with different Local Environment of Fluorine" J. Am. Chem. Soc. 131 (2009) 12949-12959. http://dx.doi.org/10.1021/ja905207t
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a library of chemical fragments with different Local Environment of Fluorine" J. Am. Chem. Soc. 131 (2009) 12949-12959. https://doi.org/10.1021/ja905207t
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2) A. Vulpetti, G. Landrum, S. Ruedisser, P. Erbel and C. Dalvit, "19F NMR Chemical Shift Prediction with
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Fluorine Fingerprint Descriptor" J. of Fluorine Chemistry (2010). http://dx.doi.org/10.1016/j.jfluchem.2009.12.024
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Fluorine Fingerprint Descriptor" J. of Fluorine Chemistry (2010). https://doi.org/10.1016/j.jfluchem.2009.12.024
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@@ -3,7 +3,7 @@ The fragment indexing algorithm used in the scripts is described in the followin
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Hussain, J., & Rea, C. (2010). "Computationally efficient algorithm to identify matched molecular pairs (MMPs)
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in large data sets." Journal of chemical information and modeling, 50(3), 339-348.
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http://dx.doi.org/10.1021/ci900450m
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https://doi.org/10.1021/ci900450m
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Wagener, M., & Lommerse, J. P. (2006). "The quest for bioisosteric replacements."
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Journal of chemical information and modeling, 46(2), 677-685.
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@@ -300,4 +300,4 @@ In the event you use the scripts for publication please reference the original p
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Hussain, J., & Rea, C. (2010). "Computationally efficient algorithm to identify matched molecular pairs (MMPs)
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in large data sets." Journal of chemical information and modeling, 50(3), 339-348.
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http://dx.doi.org/10.1021/ci900450m
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https://doi.org/10.1021/ci900450m
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