diff --git a/Code/JavaWrappers/BitOps.i b/Code/JavaWrappers/BitOps.i index 4cdec4685..f1744492d 100644 --- a/Code/JavaWrappers/BitOps.i +++ b/Code/JavaWrappers/BitOps.i @@ -68,3 +68,5 @@ %template(BitVectToText) BitVectToText; %template(FromBitString) FromBitString; %template(FromDaylightString) FromDaylightString; +%template(BitVectToFPSText) BitVectToFPSText; +%template(UpdateBitVectFromFPSText) UpdateBitVectFromFPSText; diff --git a/Code/JavaWrappers/gmwrapper/CMakeLists.txt b/Code/JavaWrappers/gmwrapper/CMakeLists.txt index 665b7d38a..f11ba76ab 100644 --- a/Code/JavaWrappers/gmwrapper/CMakeLists.txt +++ b/Code/JavaWrappers/gmwrapper/CMakeLists.txt @@ -330,6 +330,11 @@ ADD_TEST(JavaDiversityPickerTests -cp "${JUNIT_JAR}${PATH_SEP}${CMAKE_JAVA_TEST_OUTDIR}${PATH_SEP}${CMAKE_CURRENT_SOURCE_DIR}/org.RDKit.jar" org.RDKit.DiversityPickerTests) +ADD_TEST(JavaBitOpsTests + java -Djava.library.path=${CMAKE_CURRENT_SOURCE_DIR} + -cp "${JUNIT_JAR}${PATH_SEP}${CMAKE_JAVA_TEST_OUTDIR}${PATH_SEP}${CMAKE_CURRENT_SOURCE_DIR}/org.RDKit.jar" + org.RDKit.BitOpsTests) + INSTALL(TARGETS GraphMolWrap DESTINATION ${CMAKE_CURRENT_SOURCE_DIR} ) diff --git a/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/BitOpsTests.java b/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/BitOpsTests.java new file mode 100644 index 000000000..2855b6f71 --- /dev/null +++ b/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/BitOpsTests.java @@ -0,0 +1,70 @@ +/* + * + * Copyright (c) 2016, Greg Landrum + * All rights reserved. + * + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are + * met: + * + * * Redistributions of source code must retain the above copyright + * notice, this list of conditions and the following disclaimer. + * * Redistributions in binary form must reproduce the above + * copyright notice, this list of conditions and the following + * disclaimer in the documentation and/or other materials provided + * with the distribution. + * * Neither the name of Novartis Institutes for BioMedical Research Inc. + * nor the names of its contributors may be used to endorse or promote + * products derived from this software without specific prior written permission. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS + * "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT + * LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR + * A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT + * OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, + * SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT + * LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, + * DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY + * THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT + * (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE + * OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + */ +package org.RDKit; +import static org.junit.Assert.*; + +import org.junit.Test; + +public class BitOpsTests extends GraphMolTest { + @Test public void testFPS() { + ExplicitBitVect bv; + bv = new ExplicitBitVect(32); + String fps; + fps = RDKFuncs.BitVectToFPSText(bv); + assertEquals(fps,"00000000"); + bv.setBit(0); + bv.setBit(1); + bv.setBit(17); + bv.setBit(23); + bv.setBit(31); + + fps = RDKFuncs.BitVectToFPSText(bv); + assertEquals(fps,"03008280"); + } + @Test public void testFPS2() { + ExplicitBitVect bv; + bv = new ExplicitBitVect(32); + String fps="03008280"; + RDKFuncs.UpdateBitVectFromFPSText(bv,fps); + assertEquals(bv.getNumOnBits(),5); + assertTrue(bv.getBit(0)); + assertTrue(bv.getBit(1)); + assertTrue(bv.getBit(17)); + assertTrue(bv.getBit(23)); + assertTrue(bv.getBit(31)); + } + + public static void main(String args[]) { + org.junit.runner.JUnitCore.main("org.RDKit.BitOpsTests"); + } + +}