* Adds missing options docstring
* Always be cleaning
* Fix typos in RGroupDecomposition module
* Update documentation on configuring doxygen
* Was a step that I couldn't find reference to besides in the Makefile
* Undo american spelling of labelling
* British spelling appears more consistent
* Fix style of RGroupDecompositionParameters parameter
* Also fixes a typo
* Remove unintentional use of docstring
* Was assigning documentation about the parameters to the
RGroupDecomposition
* Remove empty string
* Apply suggestions from code review
Co-authored-by: Greg Landrum <greg.landrum@gmail.com>
---------
Co-authored-by: Greg Landrum <greg.landrum@gmail.com>
* Updated CMakeLists.txx
* Updated all examples, extended some.
* Added info about highlighting atoms.
* Added info about annotation to python getting started.
* Minor tweaks.
* Minor tweaks. Can only examine the rst in GitHub.
* Minor tweaks. Can only examine the rst in GitHub.
* get doctests working
* update an example image
* Include the GettingStartedInC++ doc in the standard docs build
* move the C++ docs after the python docs
* update backwards incompatible changes doc
Co-authored-by: David Cosgrove <david@cozchemix.co.uk>
Co-authored-by: greg landrum <greg.landrum@gmail.com>
* first pass at something that kind of works
* no need to document sping
* add some imported modules
* forgot to add this before
* switch to using a file per module
* disable the old api copy
* update the way links are handled
* stop auto-running doctests (sigh)
