Files
rdkit/Code/JavaWrappers/MorganFingerprints.h
jones-gareth 252fd0ac09 Added Morgan feature fingerprints to Java API (#1764)
* Added Morgan feature fingerprints to Java API

* Cosmetic change to trigger buil now Avalon tools are available
2018-03-05 21:26:56 +01:00

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761 B
C++

#include <GraphMol/Atom.h>
#include <GraphMol/GraphMol.h>
#include <GraphMol/Fingerprints/MorganFingerprints.h>
#include <DataStructs/BitVects.h>
#include <vector>
RDKit::SparseIntVect<boost::uint32_t> *getFeatureFingerprint(
const RDKit::ROMol &mol, unsigned int radius,
bool useChirality = false, bool useBondTypes=true, bool useCounts=true) {
std::vector<boost::uint32_t> *invars = new std::vector<boost::uint32_t>(mol.getNumAtoms());
RDKit::MorganFingerprints::getFeatureInvariants(mol, *invars);
RDKit::SparseIntVect<boost::uint32_t> *res = RDKit::MorganFingerprints::getFingerprint(
mol, static_cast<unsigned int>(radius), invars, 0, useChirality,
useBondTypes, useCounts, false, 0);
delete invars;
return res;
}