Files
rdkit/Code/GraphMol/MarvinParse/test_data/AlexRxn.mrv
Jonathan Bisson 56170a455d Add support for Marvin files (#6575)
* Add support for Marvin files

* And MRV lib to the Java wrapper

* And MRV lib to the Java wrapper

* Removed use of void * in MarvinParser.cpp and MarvinParser.h

* Changes as per code review from Greg

* Changes for PR review - many virtual methods

* changes as per Jonathan's comments

* some suggested changes

* PR review changes and fixed unit tests

* after merge, changes to make it run

* More PR review changes

* removed unneeded std::move()s · rdkit/rdkit@b4b8b9a · GitHub

* More PR review changes

* fix a compile error

* more defensive programming

* reorder

* final? PR review updates

* Erata

---------

Co-authored-by: Tad Hurst <tad.hurst@collaborativedrug.com>
Co-authored-by: greg landrum <greg.landrum@gmail.com>
Co-authored-by: tadhurst-cdd <112502803+tadhurst-cdd@users.noreply.github.com>
2023-09-01 04:50:34 +02:00

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<cml xmlns="http://www.chemaxon.com" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="ChemAxon file format v20.20.0, generated by vunknown" xsi:schemaLocation="http://www.chemaxon.com http://www.chemaxon.com/marvin/schema/mrvSchema_20_20_0.xsd">
<MDocument>
<MChemicalStruct>
<reaction>
<reactantList>
<molecule molID="m1">
<atomArray>
<atom id="a1" elementType="C" x2="14.0398" y2="-18.000099999999996"/>
<atom id="a2" elementType="C" x2="16.6352" y2="-17.9994"/>
<atom id="a3" elementType="C" x2="15.34" y2="-17.25"/>
<atom id="a4" elementType="C" x2="16.6352" y2="-19.500799999999998"/>
<atom id="a5" elementType="C" x2="14.0398" y2="-19.5075"/>
<atom id="a6" elementType="C" x2="15.3432" y2="-20.25"/>
<atom id="a7" elementType="C" x2="15.34094841147386" y2="-15.750000299828137"/>
</atomArray>
<bondArray>
<bond id="b1" atomRefs2="a3 a1" order="2"/>
<bond id="b2" atomRefs2="a4 a2" order="2"/>
<bond id="b3" atomRefs2="a1 a5" order="1"/>
<bond id="b4" atomRefs2="a2 a3" order="1"/>
<bond id="b5" atomRefs2="a5 a6" order="2"/>
<bond id="b6" atomRefs2="a6 a4" order="1"/>
<bond id="b7" atomRefs2="a3 a7" order="1"/>
</bondArray>
<molecule molID="m2" id="sg1" role="DataSgroup" atomRefs="a3 a7" fieldName="foo" fieldData="bar" units=""/></molecule>
</reactantList>
<agentList/>
<productList>
<molecule molID="m3">
<atomArray>
<atom id="a8" elementType="C" x2="21.614800000000002" y2="-18.000099999999996"/>
<atom id="a9" elementType="C" x2="24.210199999999997" y2="-17.9994"/>
<atom id="a10" elementType="C" x2="22.915" y2="-17.25"/>
<atom id="a11" elementType="C" x2="24.210199999999997" y2="-19.500799999999998"/>
<atom id="a12" elementType="C" x2="21.614800000000002" y2="-19.5075"/>
<atom id="a13" elementType="C" x2="22.9182" y2="-20.25"/>
<atom id="a14" elementType="C" x2="22.91594841147386" y2="-15.750000299828137"/>
</atomArray>
<bondArray>
<bond id="b8" atomRefs2="a10 a8" order="2"/>
<bond id="b9" atomRefs2="a11 a9" order="2"/>
<bond id="b10" atomRefs2="a8 a12" order="1"/>
<bond id="b11" atomRefs2="a9 a10" order="1"/>
<bond id="b12" atomRefs2="a12 a13" order="2"/>
<bond id="b13" atomRefs2="a13 a11" order="1"/>
<bond id="b14" atomRefs2="a10 a14" order="1"/>
</bondArray>
</molecule>
</productList>
<arrow type="DEFAULT" x1="17.924999999999997" y1="-18.674999999999997" x2="20.924999999999997" y2="-18.674999999999997"/>
</reaction>
</MChemicalStruct>
</MDocument>
</cml>