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rdkit/Code/GraphMol/test_data/adjustqueryprops_MDLfivering_2.mol
Greg Landrum b55376f284 Adds more options to adjustQueryProperties (#3235)
* add documentation

* backup

* first pass at 5-rings working

* add a static method to initialize an empty parameter object

* expose static method to python

* additional testing

* support the single bond adjustments

* cleanup

* preserve the symbol used in the query from a CTAB

* support the way the MDL code adjusts five-ring aromaticity in query rings

* in-code documentation

* while we're at it, cleanup the way Q and A atoms are handled in the v3k parser

* changes in response to review

* make this C++14 again.

* change in response to review
2020-06-22 09:17:50 -04:00

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Q atom
Mrv2007 06162009022D
0 0 0 0 0 999 V3000
M V30 BEGIN CTAB
M V30 COUNTS 5 5 0 0 0
M V30 BEGIN ATOM
M V30 1 Q 1.0833 6.435 0 0
M V30 2 C -0.1625 5.5298 0 0
M V30 3 C 0.3133 4.0652 0 0
M V30 4 C 1.8533 4.0652 0 0
M V30 5 C 2.3292 5.5298 0 0
M V30 END ATOM
M V30 BEGIN BOND
M V30 1 1 1 2
M V30 2 2 2 3
M V30 3 1 3 4
M V30 4 2 4 5
M V30 5 1 1 5
M V30 END BOND
M V30 END CTAB
M END