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5039c88483
* Add optional sortsupport methods to the bfp and mol/qmol indices * update the postgres version to be removed * Revert "update the postgres version to be removed" This reverts commit59c6eb12dd. * install the specific version of postgresql-client * try pinning postgresql-common too * try something else * try something else * try configuring cmake with explicit paths to version 12 * try uninstalling libpq5 * check if it's possible to run the cartridge test build w/ pg14 * Revert "check if it's possible to run the cartridge test build w/ pg14" This reverts commitf1c2f9f783. * fix the updated cartridge version number * do not by default enable the sort_support method for the bfp gist index
67 lines
2.8 KiB
C
67 lines
2.8 KiB
C
//
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// Copyright (c) 2016, Riccardo Vianello
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// All rights reserved.
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//
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// Redistribution and use in source and binary forms, with or without
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// modification, are permitted provided that the following conditions are
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// met:
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//
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// * Redistributions of source code must retain the above copyright
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// notice, this list of conditions and the following disclaimer.
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// * Redistributions in binary form must reproduce the above
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// copyright notice, this list of conditions and the following
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// disclaimer in the documentation and/or other materials provided
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// with the distribution.
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// * Neither the name of the authors nor the names of their contributors
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// may be used to endorse or promote products derived from this software
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// without specific prior written permission.
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//
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// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
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// "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
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// LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
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// A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
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// OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
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// SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
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// LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
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// DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
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// THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
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// (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
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// OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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//
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#include <RDGeneral/export.h>
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#ifndef BINARY_STRING_OPERATIONS_INCLUDED
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#define BINARY_STRING_OPERATIONS_INCLUDED
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#ifdef __cplusplus
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extern "C" {
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#endif
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void bitstringUnion(int length, uint8 *bstr1, uint8 *bstr2);
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void bitstringIntersection(int length, uint8 *bstr1, uint8 *bstr2);
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int bitstringWeight(int length, uint8 *bstr);
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int bitstringIntersectionWeight(int length, uint8 *bstr1, uint8 *bstr2);
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int bitstringDifferenceWeight(int length, uint8 *bstr1, uint8 *bstr2);
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int bitstringHemDistance(int length, uint8 *bstr1, uint8 *bstr2);
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double bitstringTanimotoSimilarity(int length, uint8 *bstr1, uint8 *bstr2);
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double bitstringTanimotoDistance(int length, uint8 *bstr1, uint8 *bstr2);
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bool bitstringContains(int length, uint8 *bstr1, uint8 *bstr2);
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bool bitstringIntersects(int length, uint8 *bstr1, uint8 *bstr2);
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bool bitstringAllTrue(int length, uint8 *bstr);
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void bitstringSimpleSubset(int length, uint8 *bstr, int sub_weight,
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uint8 *sub_bstr);
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void bitstringRandomSubset(int length, int weight, uint8 *bstr, int sub_weight,
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uint8 *sub_bstr);
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int bitstringGrayCmp(int length, uint8 *bstr1, uint8 *bstr2);
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#ifdef __cplusplus
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} /* extern "C" { */
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#endif
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#endif
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