mirror of
https://github.com/rdkit/rdkit.git
synced 2026-06-03 21:44:30 +08:00
* fix extended boundary issue (3 mols) * clang pass * no change. retrigger CI for failed java test there's a failing java test that seems to be failing by chance rather than by changes, as it depends on rng. this is just to retrigger the CI pipeline to confirm this * no change. retrigger the CI (yet again) * raw strings and removed garbage collector
167 lines
4.8 KiB
Plaintext
167 lines
4.8 KiB
Plaintext
/Code/docs/
|
|
/Code/JavaWrappers/**/*.jar
|
|
/Code/JavaWrappers/gmwrapper/src/*
|
|
/Code/JavaWrappers/gmwrapper/doc/*
|
|
/Code/JavaWrappers/gmwrapper/build/*
|
|
/Code/JavaWrappers/gmwrapper/build-test/*
|
|
/Code/JavaWrappers/csharp_wrapper/swig_csharp/*.cs
|
|
/Code/JavaWrappers/csharp_wrapper/swig_csharp/*.cxx
|
|
/Code/JavaWrappers/csharp_wrapper/swig_csharp/bin
|
|
/Code/JavaWrappers/csharp_wrapper/swig_csharp/obj
|
|
/Code/JavaWrappers/csharp_wrapper/RdkitTests/bin
|
|
/Code/JavaWrappers/csharp_wrapper/RdkitTests/obj
|
|
/Data/Fonts/ComicNeue-*
|
|
/Data/Fonts/OFL.txt
|
|
/vcpkg/*
|
|
#- Eclipse files
|
|
/.project
|
|
/.pydevproject
|
|
/.cproject
|
|
/.settings/
|
|
|
|
#- CLion files
|
|
/cmake-build-*
|
|
|
|
#- IDEA files
|
|
/.idea
|
|
|
|
#- VS Code files
|
|
/.vscode
|
|
/.vs
|
|
|
|
#- Binary files
|
|
__pycache__/
|
|
*.so
|
|
*.pyc
|
|
/lib/
|
|
*.pyd
|
|
|
|
#- autosaves and backups
|
|
*~
|
|
|
|
#- Files created during build phase
|
|
/build*/
|
|
/Docs/Book/_build*/
|
|
|
|
/Code/RDBoost/test.h
|
|
/Code/RDGeneral/RDConfig.h
|
|
/Code/RDGeneral/enum.h
|
|
/Code/RDGeneral/export.h
|
|
/Code/RDGeneral/test.h
|
|
/Code/RDGeneral/versions.h
|
|
/Code/RDGeneral/versions.cpp
|
|
|
|
/Code/GraphMol/SLNParse/lex.yysln.cpp
|
|
/Code/GraphMol/SLNParse/sln.tab.cpp
|
|
/Code/GraphMol/SLNParse/sln.tab.hpp
|
|
|
|
/Code/GraphMol/SmilesParse/lex.yysmarts.cpp
|
|
/Code/GraphMol/SmilesParse/lex.yysmiles.cpp
|
|
/Code/GraphMol/SmilesParse/smarts.tab.cpp
|
|
/Code/GraphMol/SmilesParse/smarts.tab.hpp
|
|
/Code/GraphMol/SmilesParse/smiles.tab.cpp
|
|
/Code/GraphMol/SmilesParse/smiles.tab.hpp
|
|
|
|
/External/**/*.tar.gz
|
|
/External/**/*.zip
|
|
/External/AvalonTools/SourceDistribution
|
|
/External/CoordGen/coordgen/
|
|
/External/CoordGen/maeparser/
|
|
/External/Eigen/eigen/
|
|
/External/FreeSASA/freesasa*/
|
|
/External/INCHI-API/INCHI-1-SRC/
|
|
/External/INCHI-API/src/
|
|
/External/java_lib/
|
|
/External/pubchem_shape/pubchem-align3d/
|
|
/External/RingFamilies/RingDecomposerLib/
|
|
/External/YAeHMOP/yaehmop/
|
|
/External/catch/catch/
|
|
/External/rapidjson/rapidjson-*/
|
|
|
|
/rdkit/RDPaths.py
|
|
/rdkit/Chem/inchi.py
|
|
|
|
#- Files created during tests
|
|
/Code/ForceField/MMFF/test_data/MMFF94_dative_min.sdf
|
|
/Code/ForceField/MMFF/test_data/MMFF94_dative_min_from_SMILES.sdf
|
|
/Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min.sdf
|
|
/Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min_from_SMILES.sdf
|
|
/Code/ForceField/MMFF/test_data/MMFF94_reference.log
|
|
/Code/ForceField/MMFF/test_data/MMFF94s_reference.log
|
|
/Code/ForceField/MMFF/test_data/testMMFFForceField.log
|
|
|
|
/Code/GraphMol/Depictor/test_data/cis_trans_cpp.out.sdf
|
|
/Code/GraphMol/Depictor/test_data/collisions.out.sdf
|
|
/Code/GraphMol/Depictor/test_data/first_200.out.sdf
|
|
/Code/GraphMol/Depictor/test_data/test1.out.sdf
|
|
/Code/GraphMol/Depictor/test_data/constrainedCoords.out.sdf
|
|
|
|
|
|
/Code/GraphMol/FileParsers/test_data/blah.sdf
|
|
/Code/GraphMol/FileParsers/test_data/blah_molsupplier.sdf
|
|
/Code/GraphMol/FileParsers/test_data/cdk2_stereo.sdf
|
|
/Code/GraphMol/FileParsers/test_data/cdk2_stereo_molsupplier.sdf
|
|
/Code/GraphMol/FileParsers/test_data/outNCI_few.sdf
|
|
/Code/GraphMol/FileParsers/test_data/outNCI_few.tdt
|
|
/Code/GraphMol/FileParsers/test_data/outNCI_few.sdf_molwriter.sdf
|
|
/Code/GraphMol/FileParsers/test_data/outNCI_few_molsupplier.sdf
|
|
/Code/GraphMol/FileParsers/test_data/outNCI_few_molwriter.sdf
|
|
/Code/GraphMol/FileParsers/test_data/outNCI_few_molwriter.tdt
|
|
/Code/GraphMol/FileParsers/test_data/outNCI_first_200.props.sdf
|
|
/Code/GraphMol/FileParsers/test_data/outNCI_first_200.props_molwriter.sdf
|
|
/Code/GraphMol/FileParsers/test_data/outSmiles.csv
|
|
/Code/GraphMol/FileParsers/test_data/outSmiles_molsupplier.csv
|
|
/Code/GraphMol/FileParsers/test_data/outSmiles_molwriter.csv
|
|
/Code/GraphMol/FileParsers/test_data/testSGroupsSample_V?000.mol
|
|
/Code/GraphMol/FileParsers/test_data/testSubstanceGroupsSample_V?000.mol
|
|
|
|
/Code/GraphMol/ForceFieldHelpers/UFF/test_data/Issue62.sdf
|
|
|
|
/Code/GraphMol/MolAlign/test_data/ref_e2_pyCrippenO3A.sdf
|
|
|
|
/Code/GraphMol/MolDraw2D/Comic_Neue.zip
|
|
|
|
/Code/GraphMol/MolTransforms/test_data/github4302_canon.sdf
|
|
|
|
/Code/GraphMol/Wrap/test_data/bilastine_trajectory.sdf
|
|
/Code/GraphMol/Wrap/test_data/outMaeWriter.mae
|
|
/Code/GraphMol/Wrap/test_data/outNCI_few.sdf
|
|
/Code/GraphMol/Wrap/test_data/outSmiles.txt
|
|
|
|
/Code/GraphMol/test_data/bilastine_trajectory.sdf
|
|
/Code/GraphMol/test_data/prop.pkl
|
|
|
|
/Data/eht_parms.dat
|
|
|
|
/External/pubchem_shape/test_data/bulk.pubchem_out.sdf
|
|
|
|
/Projects/DbCLI/testData/bzr/
|
|
|
|
/rdkit/sping/tests/testallps.ps
|
|
|
|
/rdkit/ML/Data/test_data/testgeneral.dat.pkl
|
|
/rdkit/ML/Data/test_data/testquant.qdat.pkl
|
|
.DS_Store
|
|
|
|
/rdkit/fragmentshetero_atom_mutations_fuzzing.csv
|
|
/rdkit/fragmentsnot_changed_during_fuzzing.csv
|
|
/rdkit/hetero_atom_mutations.csv
|
|
/rdkit/not_changed.csv
|
|
/rdkit/similarityMap1_out.svg
|
|
/rdkit/similarityMap1_out*.svg
|
|
/rdkit/github4763.svg
|
|
|
|
/Testing/
|
|
|
|
# JS distribution or temp files
|
|
Code/MinimalLib/dist
|
|
MAIN_RDKIT_README*
|
|
node_modules
|
|
|
|
/.cache
|
|
/Code/GraphMol/MolInteractionFields/Wrap/testData/test4.cube
|
|
/Code/GraphMol/MolInteractionFields/test_data/test3.cube
|
|
/compile_commands.json
|
|
/External/ChemDraw/chemdraw
|
|
/External/AvalonTools/ava-formake-AvalonToolkit*
|