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https://github.com/rdkit/rdkit.git
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253f172353
* add AtomValenceException * refactor a bit and add KekulizeException * add copy ctor and copy() method * add detectChemistryProblems * add getType() method want to be able to get the type of the exception without requiring doing a bunch of dynamic casts * first pass at exception inheritance/translation needs some cleanup and expansion, but this does pass all tests. * cleanup and finish the python wrappers for the new exceptions * make sure things are truly polymorphic * wrap shared_ptrs of the new exception types * expose DetectChemistryProblems() * get the java wrappers building again * transfer those changes to the c# wrapper * add detectChemistryProblems() and deal with the fun fun exception inheritance things that ensue * response to review
105 lines
3.8 KiB
OpenEdge ABL
105 lines
3.8 KiB
OpenEdge ABL
/*
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* $Id$
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*
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* Copyright (c) 2010, Novartis Institutes for BioMedical Research Inc.
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* All rights reserved.
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*
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* Redistribution and use in source and binary forms, with or without
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* modification, are permitted provided that the following conditions are
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* met:
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*
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* * Redistributions of source code must retain the above copyright
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* notice, this list of conditions and the following disclaimer.
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* * Redistributions in binary form must reproduce the above
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* copyright notice, this list of conditions and the following
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* disclaimer in the documentation and/or other materials provided
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* with the distribution.
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* * Neither the name of Novartis Institutes for BioMedical Research Inc.
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* nor the names of its contributors may be used to endorse or promote
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* products derived from this software without specific prior written permission.
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*
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* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
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* "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
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* LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
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* A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
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* OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
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* SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
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* LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
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* DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
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* THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
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* (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
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* OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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*/
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%{
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#include <GraphMol/SanitException.h>
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%}
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%include <GraphMol/SanitException.h>
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#ifdef SWIGJAVA
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// support upcasting from MolSanitizeException to the other exception types so that
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// we can do something with the output of detectChemistryProblems()
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// approach from: http://www.swig.org/Doc3.0/Java.html#Java_adding_downcasts
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%exception RDKit::AtomSanitizeException::dynamic_cast(RDKit::MolSanitizeException) {
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$action
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if(!result){
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jclass excep = jenv->FindClass("java/lang/ClassCastException");
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if (excep) {
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jenv->ThrowNew(excep, "dynamic_cast exception");
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}
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}
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}
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%extend RDKit::AtomSanitizeException {
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static RDKit::AtomSanitizeException *dynamic_cast(RDKit::MolSanitizeException *mse){
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return dynamic_cast<RDKit::AtomSanitizeException *>(mse);
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}
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};
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%exception RDKit::AtomValenceException::dynamic_cast(RDKit::MolSanitizeException) {
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$action
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if(!result){
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jclass excep = jenv->FindClass("java/lang/ClassCastException");
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if (excep) {
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jenv->ThrowNew(excep, "dynamic_cast exception");
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}
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}
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}
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%extend RDKit::AtomValenceException {
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static RDKit::AtomValenceException *dynamic_cast(RDKit::MolSanitizeException *mse){
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return dynamic_cast<RDKit::AtomValenceException *>(mse);
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}
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};
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%exception RDKit::AtomKekulizeException::dynamic_cast(RDKit::MolSanitizeException) {
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$action
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if(!result){
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jclass excep = jenv->FindClass("java/lang/ClassCastException");
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if (excep) {
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jenv->ThrowNew(excep, "dynamic_cast exception");
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}
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}
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}
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%extend RDKit::AtomKekulizeException {
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static RDKit::AtomKekulizeException *dynamic_cast(RDKit::MolSanitizeException *mse){
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return dynamic_cast<RDKit::AtomKekulizeException *>(mse);
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}
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};
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%exception RDKit::KekulizeException::dynamic_cast(RDKit::MolSanitizeException) {
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$action
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if(!result){
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jclass excep = jenv->FindClass("java/lang/ClassCastException");
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if (excep) {
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jenv->ThrowNew(excep, "dynamic_cast exception");
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}
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}
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}
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%extend RDKit::KekulizeException {
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static RDKit::KekulizeException *dynamic_cast(RDKit::MolSanitizeException *mse){
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return dynamic_cast<RDKit::KekulizeException *>(mse);
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}
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};
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#endif |