Greg Landrum ae774c4f24 add support the new sequence readers to wrappers (#1181) (#1221) ...

* Fixes #1181
needs more testing

* improved docs and a couple tests

* add the new sequence support to the java wrappers too

2016-12-21 04:42:17 +01:00

..

test_data

Issue1071/yapf (#1078)

2016-09-23 04:58:46 +02:00

Atom.cpp

Fixes #1088 (#1096)

2016-10-12 08:20:43 +02:00

Bond.cpp

Fixes #1051

2016-09-02 11:23:43 +02:00

CMakeLists.txt

get the new multi-mol drawing code building properly on windows (#1072)

2016-09-22 06:12:58 +02:00

CompressedSDMolSupplier.cpp

first pass, using google style

2015-11-14 14:58:11 +01:00

Conformer.cpp

Conformer GetPos returns a numpy array rather than a tuple of tuples (#1087)

2016-10-14 05:02:59 +02:00

EditableMol.cpp

first pass, using google style

2015-11-14 14:58:11 +01:00

ForwardSDMolSupplier.cpp

first pass, using google style

2015-11-14 14:58:11 +01:00

Mol.cpp

Expose RWMol.ReplaceBond to Python (#1174)

2016-11-21 09:41:53 -05:00

MolOps.cpp

Find potential stereo bonds should return any (#1202)

2016-12-17 05:37:30 +01:00

MolSupplier.h

first pass, using google style

2015-11-14 14:58:11 +01:00

MonomerInfo.cpp

first pass, using google style

2015-11-14 14:58:11 +01:00

PDBWriter.cpp

first pass, using google style

2015-11-14 14:58:11 +01:00

props.hpp

Check for doubles after other integer types when reporting properties (#1115)

2016-10-21 20:43:43 -04:00

Queries.cpp

Adds some additional canned atom and bond query definitions (#1047)

2016-09-09 10:31:02 -04:00

rdchem.cpp

cleanups of RDLog's tee behavior (#926)

2016-05-30 10:04:59 -04:00

rdchem.h

Conformer GetPos returns a numpy array rather than a tuple of tuples (#1087)

2016-10-14 05:02:59 +02:00

rdmolfiles.cpp

add support the new sequence readers to wrappers (#1181) (#1221)

2016-12-21 04:42:17 +01:00

rdmolfiles.h

first pass, using google style

2015-11-14 14:58:11 +01:00

rdmolops.cpp

add some additional parameters tests to python wrapper;

2016-11-06 10:09:57 +01:00

rdmolops.h

first pass, using google style

2015-11-14 14:58:11 +01:00

rdqueries.cpp

Remove extra calls to python::register_exception_translator

2016-03-01 06:36:54 +01:00

rdTrajectory.cpp

- added miising Code/GraphMol/Wrap/rdTrajectory.cpp

2016-05-11 19:56:32 +01:00

ResonanceMolSupplier.cpp

first pass, using google style

2015-11-14 14:58:11 +01:00

RingInfo.cpp

first pass, using google style

2015-11-14 14:58:11 +01:00

rough_test.py

add support the new sequence readers to wrappers (#1181) (#1221)

2016-12-21 04:42:17 +01:00

SDMolSupplier.cpp

first pass, using google style

2015-11-14 14:58:11 +01:00

SDWriter.cpp

rename method to getText()

2016-03-31 05:17:41 +02:00

seqs.hpp

Suppresses Boost warnings

2015-10-18 13:41:03 -04:00

SmilesMolSupplier.cpp

first pass, using google style

2015-11-14 14:58:11 +01:00

SmilesWriter.cpp

first pass, using google style

2015-11-14 14:58:11 +01:00

Table.cpp

first pass, using google style

2015-11-14 14:58:11 +01:00

TDTMolSupplier.cpp

first pass, using google style

2015-11-14 14:58:11 +01:00

TDTWriter.cpp

first pass, using google style

2015-11-14 14:58:11 +01:00

test_list.py

Issue1071/yapf (#1078)

2016-09-23 04:58:46 +02:00

testConformer.py

yapf formatting of recent changes to Python code in rdkit and Code

2016-10-24 11:57:08 -04:00

testThreads.py

Issue1071/yapf (#1078)

2016-09-23 04:58:46 +02:00

testTrajectory.py

Fix trajectory tests

2016-11-15 13:47:52 +00:00

Trajectory.cpp

- re-applied Trajector Python docstring changes

2016-05-16 09:25:25 +01:00