Files
rdkit/Code/JavaWrappers/RDKitExceptions.i
Greg Landrum 8127c85a91 [v2 API] SMILES/SMARTS parsers (#6203)
* basic approach to v2api

* does not work, backup commit

* well, that now compiles

* cleaner

* more cleanup and testing

* get the SWIG wrappers to build

* swig wrappers now build

* switch back to using references to default values

* adjust to new catch version

* move the implementation to v2 and call it from v1

* update the parameter object too

* move debugParse down

* a couple of review changes

* make v2 naming consistent with Python
2024-01-19 17:17:51 +01:00

199 lines
6.9 KiB
OpenEdge ABL

/*
* $Id$
*
* Copyright (c) 2010, Novartis Institutes for BioMedical Research Inc.
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are
* met:
*
* * Redistributions of source code must retain the above copyright
* notice, this list of conditions and the following disclaimer.
* * Redistributions in binary form must reproduce the above
* copyright notice, this list of conditions and the following
* disclaimer in the documentation and/or other materials provided
* with the distribution.
* * Neither the name of Novartis Institutes for BioMedical Research Inc.
* nor the names of its contributors may be used to endorse or promote
* products derived from this software without specific prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
* "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
* LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
* A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
* OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
* SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
* LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
* DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
* THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
* (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
* OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
// Defines all of the C++ -> Java exception handling
%{
#include <RDGeneral/Exceptions.h>
#include <JavaWrappers/GenericRDKitException.h>
%}
// ===== ChemicalReactionException =====
%typemap(javabase) RDKit::ChemicalReactionException "java.lang.RuntimeException";
%typemap(throws, throws="org.RDKit.ChemicalReactionException") RDKit::ChemicalReactionException {
jclass excep = jenv->FindClass("org/RDKit/ChemicalReactionException");
if (excep)
jenv->ThrowNew(excep, $1.what());
return $null;
}
%typemap(javacode) RDKit::ChemicalReactionException %{
public String getMessage() {
return what();
}
%}
// ===== ChemicalReactionParserException =====
%typemap(javabase) RDKit::ChemicalReactionParserException "java.lang.RuntimeException";
%typemap(throws, throws="org.RDKit.ChemicalReactionParserException") RDKit::ChemicalReactionParserException {
jclass excep = jenv->FindClass("org/RDKit/ChemicalReactionParserException");
if (excep)
jenv->ThrowNew(excep, $1.what());
return $null;
}
%typemap(javacode) RDKit::ChemicalReactionParserException %{
public String getMessage() {
return what();
}
%}
// ===== ConformerException =====
%typemap(javabase) RDKit::ConformerException "java.lang.RuntimeException";
%typemap(throws, throws="org.RDKit.ConformerException") RDKit::ConformerException {
jclass excep = jenv->FindClass("org/RDKit/ConformerException");
if (excep)
jenv->ThrowNew(excep, $1.what());
return $null;
}
%typemap(javacode) RDKit::ConformerException %{
public String getMessage() {
return what();
}
%}
// ===== MolPicklerException =====
%typemap(javabase) RDKit::MolPicklerException "java.lang.RuntimeException";
%typemap(throws, throws="org.RDKit.MolPicklerException") RDKit::MolPicklerException {
jclass excep = jenv->FindClass("org/RDKit/MolPicklerException");
if (excep)
jenv->ThrowNew(excep, $1.what());
return $null;
}
%typemap(javacode) RDKit::MolPicklerException %{
public String getMessage() {
return what();
}
%}
// ===== MolSanitizeException =====
%typemap(javabase) RDKit::MolSanitizeException "java.lang.RuntimeException";
%typemap(throws, throws="org.RDKit.MolSanitizeException") RDKit::MolSanitizeException {
jclass excep = jenv->FindClass("org/RDKit/MolSanitizeException");
if (excep)
jenv->ThrowNew(excep, $1.what());
return $null;
}
%typemap(javacode) RDKit::MolSanitizeException %{
public String getMessage() {
return what();
}
%}
// ===== SmilesParseException =====
%typemap(javabase) RDKit::SmilesParse::SmilesParseException "java.lang.RuntimeException";
%typemap(throws, throws="org.RDKit.SmilesParseException") RDKit::SmilesParse::SmilesParseException {
jclass excep = jenv->FindClass("org/RDKit/SmilesParseException");
if (excep)
jenv->ThrowNew(excep, $1.what());
return $null;
}
%typemap(javacode) RDKit::SmilesParse::SmilesParseException %{
public String getMessage() {
return what();
}
%}
// ===== KeyErrorException =====
%typemap(javabase) KeyErrorException "java.lang.RuntimeException";
%typemap(throws, throws="org.RDKit.KeyErrorException") KeyErrorException {
jclass excep = jenv->FindClass("org/RDKit/KeyErrorException");
if (excep)
jenv->ThrowNew(excep, $1.what());
return $null;
}
%typemap(javacode) RDKit::KeyErrorException %{
public String getMessage() {
return what();
}
%}
// ===== GenericRDKitException =====
%typemap(javabase) RDKit::GenericRDKitException "java.lang.RuntimeException";
%typemap(throws, throws="org.RDKit.GenericRDKitException") RDKit::GenericRDKitException {
jclass excep = jenv->FindClass("org/RDKit/GenericRDKitException");
if (excep)
jenv->ThrowNew(excep, $1.what());
return $null;
}
%typemap(javacode) RDKit::GenericRDKitException %{
public String getMessage() {
return what();
}
%}
// Note that these files must follow the typemap declarations
%include <RDGeneral/Exceptions.h>
%include <JavaWrappers/GenericRDKitException.h>
%exception {
try {
$action
} catch (RDKit::ChemicalReactionException &e) {
jclass clazz = jenv->FindClass("org/RDKit/ChemicalReactionException");
jenv->ThrowNew(clazz, e.what());
return $null;
} catch (RDKit::ChemicalReactionParserException &e) {
jclass clazz = jenv->FindClass("org/RDKit/ChemicalReactionParserException");
jenv->ThrowNew(clazz, e.what());
return $null;
} catch (RDKit::ConformerException &e) {
jclass clazz = jenv->FindClass("org/RDKit/ConformerException");
jenv->ThrowNew(clazz, e.what());
return $null;
} catch (RDKit::MolPicklerException &e) {
jclass clazz = jenv->FindClass("org/RDKit/MolPicklerException");
jenv->ThrowNew(clazz, e.what());
return $null;
} catch (RDKit::MolSanitizeException &e) {
jclass clazz = jenv->FindClass("org/RDKit/MolSanitizeException");
jenv->ThrowNew(clazz, e.what());
return $null;
} catch (RDKit::SmilesParseException &e) {
jclass clazz = jenv->FindClass("org/RDKit/SmilesParseException");
jenv->ThrowNew(clazz, e.what());
return $null;
} catch (KeyErrorException &e) {
jclass clazz = jenv->FindClass("org/RDKit/KeyErrorException");
jenv->ThrowNew(clazz, e.key().c_str());
return $null;
// Generic exception -- anything else
} catch (std::exception &e) {
jclass clazz = jenv->FindClass("org/RDKit/GenericRDKitException");
jenv->ThrowNew(clazz, "Unknown exception");
return $null;
}
}