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rdkit/Code/Demos/SWIG/java_example/RDKFuncs.cpp

42 lines
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C++

// $Id$
//
// Copyright (C) 2008 Greg Landrum
// All Rights Reserved
//
#include <string>
#include <GraphMol/RDKitBase.h>
#include <GraphMol/MolPickler.h>
#include <GraphMol/SmilesParse/SmilesParse.h>
#include <GraphMol/SmilesParse/SmilesWrite.h>
#include <GraphMol/Substruct/SubstructMatch.h>
#include <GraphMol/ChemReactions/ReactionParser.h>
#include "RDKFuncs.h"
using namespace RDKit;
//ROMol *MolFromSmiles(std::string smi) {
ROMOL_SPTR MolFromSmiles(std::string smi) {
return ROMOL_SPTR(SmilesToMol(smi));;
};
ROMOL_SPTR MolFromSmarts(std::string sma) {
return ROMOL_SPTR(SmartsToMol(sma));
};
std::string MolToSmiles(ROMOL_SPTR mol,bool doIsomericSmiles,
bool doKekule, int rootedAtAtom) {
return MolToSmiles(*mol,doIsomericSmiles,doKekule,rootedAtAtom);
};
bool hasSubstructMatch(ROMol &mol,ROMol &query,bool useChirality,
bool registerQuery){
MatchVectType mv;
return SubstructMatch(mol,query,mv,true,useChirality,registerQuery);
};
ChemicalReaction *ReactionFromSmarts(std::string sma) {
return RxnSmartsToChemicalReaction(sma);
};