Files
rdkit/Code/JavaWrappers/ChemTransforms.i
Brian Kelley 71a0ae32b2 Adds replaceCore function that takes a matchVect (#1013)
* Adds replaceCore function that takes a matchVect

* Fixes error reporting, adds tests

* Switches PRECONDITION to ValueError exceptions

* Fixes MatchVectType annoyance in swig.  Don't know why this is necessary.

* Silences warnings

* Adds working doctests and better explanations.
2016-08-17 04:40:59 +02:00

57 lines
2.4 KiB
OpenEdge ABL

/*
* $Id$
*
* Copyright (c) 2011, Novartis Institutes for BioMedical Research Inc.
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are
* met:
*
* * Redistributions of source code must retain the above copyright
* notice, this list of conditions and the following disclaimer.
* * Redistributions in binary form must reproduce the above
* copyright notice, this list of conditions and the following
* disclaimer in the documentation and/or other materials provided
* with the distribution.
* * Neither the name of Novartis Institutes for BioMedical Research Inc.
* nor the names of its contributors may be used to endorse or promote
* products derived from this software without specific prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
* "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
* LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
* A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
* OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
* SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
* LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
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* OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
%{
#include <GraphMol/ChemTransforms/ChemTransforms.h>
// Fixes annoying compilation namespace issue
typedef RDKit::MatchVectType MatchVectType;
%}
%newobject deleteSubstructs;
%newobject replaceSidechains;
%newobject replaceCores;
%newobject MurckoDecompose;
%template(StringMolMap) std::map<std::string,boost::shared_ptr<RDKit::ROMol> >;
%include <GraphMol/ChemTransforms/ChemTransforms.h>
%ignore fragmentOnBonds;
%ignore fragmentOnSomeBonds;
%ignore constructFragmenterAtomTypes;
%ignore constructBRICSAtomTypes;
%ignore constructFragmenterBondTypes;
%ignore constructBRICSBondTypes;
%newobject fragmentOnBRICSBonds;
%template(UIntMolMap) std::map<unsigned int,boost::shared_ptr<RDKit::ROMol> >;
%include <GraphMol/ChemTransforms/MolFragmenter.h>