Files
rdkit/Code/GraphMol/Wrap/ChiralityOps.cpp
Greg Landrum 170796a175 Fixes some problems with findPotentialStereo() (#3499)
* backup, definitely does not work

* remove obsolete test
(not even really sure anymore that's a bug)

* remove code from a false path

* at this point the code passes all tests

* backup

* handle isotopes and h counts properly

* remove some compiler warnings

* all tests passing

* Use InChI minimimum ring size for bonds

* Fixes edge-case bug in canonicalization when bond labels are provided

* cleanup, no substance here

* fixes the last set of problems I've seen

* document that this is still experimental

* remove obsolete/testing comments

* stop considering charge and H count in chirality
2020-10-17 04:35:58 +02:00

38 lines
1.2 KiB
C++

//
// Copyright (C) 2020 Greg Landrum and T5 Informatics GmbH
//
// @@ All Rights Reserved @@
// This file is part of the RDKit.
// The contents are covered by the terms of the BSD license
// which is included in the file license.txt, found at the root
// of the RDKit source tree.
//
#include <RDBoost/python.h>
#include <string>
#include <GraphMol/RDKitBase.h>
#include <GraphMol/Chirality.h>
#include <RDBoost/Wrap.h>
namespace python = boost::python;
namespace RDKit {
struct chiralityops_wrapper {
static void wrap() {
RegisterVectorConverter<Chirality::StereoInfo>();
python::def("FindPotentialStereo",
(std::vector<Chirality::StereoInfo>(*)(ROMol &, bool, bool)) &
Chirality::findPotentialStereo,
(python::arg("mol"), python::arg("cleanIt") = false,
python::arg("flagPossible") = true),
"find potential stereo elements in a molecule\n\
Note that this function is still somewhat experimental and the API\n\
and results may change in a future release.",
python::with_custodian_and_ward_postcall<0, 1>());
};
};
} // namespace RDKit
void wrap_chiralityops() { RDKit::chiralityops_wrapper::wrap(); }