Files
rdkit/Code/JavaWrappers/CMakeLists.txt
Jonathan Bisson 56170a455d Add support for Marvin files (#6575)
* Add support for Marvin files

* And MRV lib to the Java wrapper

* And MRV lib to the Java wrapper

* Removed use of void * in MarvinParser.cpp and MarvinParser.h

* Changes as per code review from Greg

* Changes for PR review - many virtual methods

* changes as per Jonathan's comments

* some suggested changes

* PR review changes and fixed unit tests

* after merge, changes to make it run

* More PR review changes

* removed unneeded std::move()s · rdkit/rdkit@b4b8b9a · GitHub

* More PR review changes

* fix a compile error

* more defensive programming

* reorder

* final? PR review updates

* Erata

---------

Co-authored-by: Tad Hurst <tad.hurst@collaborativedrug.com>
Co-authored-by: greg landrum <greg.landrum@gmail.com>
Co-authored-by: tadhurst-cdd <112502803+tadhurst-cdd@users.noreply.github.com>
2023-09-01 04:50:34 +02:00

75 lines
2.5 KiB
CMake

find_package(SWIG REQUIRED)
include(${SWIG_USE_FILE})
INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR})
include_directories(${RDKit_CodeDir})
include_directories(${Boost_INCLUDE_DIRS})
SET(CMAKE_SWIG_FLAGS "")
set(swigRDKitLibSuffix "")
if(RDK_SWIG_STATIC AND (NOT WIN32))
set(swigRDKitLibSuffix "_static")
endif()
set(swigRDKitLibList "")
if(RDK_BUILD_AVALON_SUPPORT)
set(swigRDKitLibList "${swigRDKitLibList}AvalonLib;avalon_clib;")
endif(RDK_BUILD_AVALON_SUPPORT)
if(RDK_BUILD_INCHI_SUPPORT)
set(swigRDKitLibList "${swigRDKitLibList}RDInchiLib;${INCHI_LIBRARIES};")
endif(RDK_BUILD_INCHI_SUPPORT)
set(swigRDKitLibList "${swigRDKitLibList}"
"Abbreviations;ScaffoldNetwork;MolHash;RGroupDecomposition;SubstructLibrary;TautomerQuery;"
"MolEnumerator;"
"MolStandardize;FilterCatalog;Catalogs;FMCS;MolDraw2D;FileParsers;SmilesParse;MarvinParser;"
"Depictor;SubstructMatch;ChemReactions;Fingerprints;ChemTransforms;"
"Subgraphs;GraphMol;DataStructs;Trajectory;Descriptors;"
"PartialCharges;MolTransforms;DistGeomHelpers;DistGeometry;"
"ForceFieldHelpers;ForceField;EigenSolvers;Optimizer;MolAlign;O3AAlign;"
"Alignment;SimDivPickers;RDGeometryLib;RDStreams;RDGeneral;"
)
#if(RDK_BUILD_COORDGEN_SUPPORT)
# set(swigRDKitLibList "${swigRDKitLibList};${RDK_COORDGEN_LIBS}")
#endif(RDK_BUILD_COORDGEN_SUPPORT)
if(RDK_USE_URF)
set(swigRDKitLibList "${swigRDKitLibList};${RDK_URF_LIBS};")
endif(RDK_USE_URF)
set(swigRDKitLibs "")
foreach(swigRDKitLib ${swigRDKitLibList})
set(swigRDKitLibs "${swigRDKitLibs}${swigRDKitLib}${swigRDKitLibSuffix};")
endforeach()
set(swigRDKitLibs "${swigRDKitLibs}${Boost_SERIALIZATION_LIBRARY};")
if(RDK_USE_BOOST_IOSTREAMS)
ADD_DEFINITIONS("-DRDK_USE_BOOST_IOSTREAMS")
if(WIN32)
find_package(Boost ${RDK_BOOST_VERSION} COMPONENTS system iostreams REQUIRED)
set(swigRDKitLibs "${swigRDKitLibs}${Boost_IOSTREAMS_LIBRARY};${Boost_SYSTEM_LIBRARY};")
find_package(Boost ${RDK_BOOST_VERSION} COMPONENTS zlib)
if(Boost_ZLIB_FOUND)
set(swigRDKitLibs "${swigRDKitLibs}${Boost_ZLIB_LIBRARY};")
endif()
else()
find_package(Boost ${RDK_BOOST_VERSION} COMPONENTS system iostreams REQUIRED)
set(swigRDKitLibs "${swigRDKitLibs}${Boost_IOSTREAMS_LIBRARY};${Boost_SYSTEM_LIBRARY};")
endif()
endif(RDK_USE_BOOST_IOSTREAMS)
set(RDKit_Wrapper_Libs ${swigRDKitLibs})
message("SUFFIX: ${swigRDKitLibSuffix}")
message("JAVA_LIBS: ${RDKit_Wrapper_Libs}")
if(RDK_BUILD_SWIG_JAVA_WRAPPER)
add_subdirectory(gmwrapper)
endif()
if(RDK_BUILD_SWIG_CSHARP_WRAPPER)
add_subdirectory(csharp_wrapper)
endif()