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169 lines
6.4 KiB
OpenEdge ABL
169 lines
6.4 KiB
OpenEdge ABL
/*
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* $Id$
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*
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* Copyright (c) 2010, Novartis Institutes for BioMedical Research Inc.
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* All rights reserved.
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*
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* Redistribution and use in source and binary forms, with or without
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* modification, are permitted provided that the following conditions are
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* met:
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*
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* * Redistributions of source code must retain the above copyright
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* notice, this list of conditions and the following disclaimer.
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* * Redistributions in binary form must reproduce the above
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* copyright notice, this list of conditions and the following
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* disclaimer in the documentation and/or other materials provided
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* with the distribution.
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* * Neither the name of Novartis Institutes for BioMedical Research Inc.
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* nor the names of its contributors may be used to endorse or promote
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* products derived from this software without specific prior written permission.
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*
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* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
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* "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
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* LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
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* A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
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* OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
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* SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
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* LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
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* DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
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* THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
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* (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
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* OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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*/
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%typemap(javaimports) RDKit::PeriodicTable "
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/**
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singleton class for retrieving information about atoms
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<p>
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Use the singleton like this:
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<p>
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const PeriodicTable *tbl = PeriodicTable::getTable();
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tbl->getAtomicWeight(6); // get atomic weight for Carbon
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tbl->getAtomicWeight('C'); // get atomic weight for Carbon
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*/"
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%javamethodmodifiers RDKit::PeriodicTable::getAtomicWeight ( char * elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getAtomicWeight ( const std::string & elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getDefaultValence ( char * elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getDefaultValence ( const std::string & elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getNouterElecs ( char * elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getNouterElecs ( const std::string & elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getRb0 ( char * elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getRb0 ( const std::string & elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getRcovalent ( char * elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getRcovalent ( const std::string & elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getRvdw ( char * elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getRvdw ( const std::string & elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getValenceList ( char * elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getValenceList ( const std::string & elementSymbol ) const "
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/**
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<p>
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This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::getValenceList ( UINT atomicNumber ) const "
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/**
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<p>
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<p>
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@return
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a vector of all stable valences. For atoms where we really don't have any idea what a reasonable maximum valence is (like transition metals), the vector ends with -1
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1
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*/
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public";
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%javamethodmodifiers RDKit::PeriodicTable::moreElectroNegative ( UINT anum1, UINT anum2 ) const "
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/**
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<p>
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convenience function to determine which atom is more electronegative
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<p>
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check if atom with atomic number anum1 is more electronegative than the one with anum2 this is rather lame but here is how we do it
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<p>
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* the atom with the higher number of outer shell electrons is considered more electronegative
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* if the # of outer shell elecs are the same the atom with the lower atomic weight is more electronegative
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<p>
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*/
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public";
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