mirror of
https://github.com/KosinskiLab/AlphaPulldown.git
synced 2026-06-04 14:14:24 +08:00
Publish HTML coverage reports via GitHub Pages
This commit is contained in:
61
.github/workflows/github_actions.yml
vendored
61
.github/workflows/github_actions.yml
vendored
@@ -9,6 +9,9 @@ on:
|
||||
types: [published]
|
||||
workflow_dispatch:
|
||||
|
||||
permissions:
|
||||
contents: read
|
||||
|
||||
jobs:
|
||||
smoke-tests:
|
||||
runs-on: ubuntu-latest
|
||||
@@ -86,6 +89,35 @@ jobs:
|
||||
python test/tools/check_function_coverage.py --report-only coverage.json
|
||||
coverage report --fail-under=25 --skip-covered --show-missing
|
||||
|
||||
- name: Prepare coverage site
|
||||
run: |
|
||||
mkdir -p _site/coverage
|
||||
cp -R htmlcov/. _site/coverage/
|
||||
cat > _site/index.html <<'EOF'
|
||||
<!DOCTYPE html>
|
||||
<html lang="en">
|
||||
<head>
|
||||
<meta charset="utf-8">
|
||||
<meta http-equiv="refresh" content="0; url=coverage/">
|
||||
<title>AlphaPulldown Coverage</title>
|
||||
</head>
|
||||
<body>
|
||||
<p>Redirecting to the latest coverage report...</p>
|
||||
<p><a href="coverage/">Open coverage report</a></p>
|
||||
</body>
|
||||
</html>
|
||||
EOF
|
||||
|
||||
- name: Coverage summary
|
||||
run: |
|
||||
{
|
||||
echo "## Coverage reports"
|
||||
echo ""
|
||||
echo "- Raw artifact: \`coverage-reports\`"
|
||||
echo "- HTML entrypoint inside artifact: \`htmlcov/index.html\`"
|
||||
echo "- Latest browsable HTML report is published from the \`main\` branch via the Pages job."
|
||||
} >> "$GITHUB_STEP_SUMMARY"
|
||||
|
||||
- uses: actions/upload-artifact@v4
|
||||
with:
|
||||
name: coverage-reports
|
||||
@@ -94,6 +126,35 @@ jobs:
|
||||
coverage.xml
|
||||
htmlcov
|
||||
|
||||
- name: Upload coverage site artifact
|
||||
if: github.ref == 'refs/heads/main' && (github.event_name == 'push' || github.event_name == 'workflow_dispatch')
|
||||
uses: actions/upload-pages-artifact@v3
|
||||
with:
|
||||
path: _site
|
||||
|
||||
coverage-pages:
|
||||
if: github.ref == 'refs/heads/main' && (github.event_name == 'push' || github.event_name == 'workflow_dispatch')
|
||||
needs: coverage
|
||||
runs-on: ubuntu-latest
|
||||
permissions:
|
||||
pages: write
|
||||
id-token: write
|
||||
contents: read
|
||||
environment:
|
||||
name: github-pages
|
||||
url: ${{ steps.deployment.outputs.page_url }}
|
||||
steps:
|
||||
- id: deployment
|
||||
uses: actions/deploy-pages@v4
|
||||
|
||||
- name: Pages summary
|
||||
run: |
|
||||
{
|
||||
echo "## Coverage HTML"
|
||||
echo ""
|
||||
echo "Latest coverage site: ${{ steps.deployment.outputs.page_url }}"
|
||||
} >> "$GITHUB_STEP_SUMMARY"
|
||||
|
||||
build-alphafold2-container:
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
|
||||
Reference in New Issue
Block a user