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Change fasta description used in data pipeline to be chain_<chain number>.

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PiperOrigin-RevId: 407584472
Change-Id: Icfa755722ddabff71d27f4a3d07f9e88a409c3a6
This commit is contained in:
Andrew Cowie
2021-11-04 08:21:19 -07:00
committed by Copybara-Service
parent 0be2b30b98
commit c128d1aa2c
1 changed files with 1 additions and 1 deletions
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alphafold/data/pipeline_multimer.py
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@@ -202,7 +202,7 @@ class DataPipeline:
msa_output_dir: str,
is_homomer_or_monomer: bool) -> pipeline.FeatureDict:
"""Runs the monomer pipeline on a single chain."""
chain_fasta_str = f'>{description}\n{sequence}\n'
chain_fasta_str = f'>chain_{chain_id}\n{sequence}\n'
chain_msa_output_dir = os.path.join(msa_output_dir, chain_id)
if not os.path.exists(chain_msa_output_dir):
os.makedirs(chain_msa_output_dir)