Update the output documentation with case sensitivity and force_output_dir

PiperOrigin-RevId: 789369238
Change-Id: I2ccab4e220300646dba2f8882a82ad1e21c1523f
This commit is contained in:
Augustin Zidek
2025-07-31 09:39:33 -07:00
committed by Copybara-Service
parent ec4254ac5d
commit 3c4de6bb9b

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@@ -3,10 +3,11 @@
## Output Directory Structure
For every input job, AlphaFold 3 writes all its outputs in a directory called by
the sanitized version of the job name. E.g. for job name "My first fold (test)",
AlphaFold 3 will write its outputs in a directory called `my_first_fold_test`.
If such directory already exists, AlphaFold 3 will append a timestamp to the
directory name to avoid overwriting existing data.
the sanitized version of the job name. E.g. for job name "My first fold (TEST)",
AlphaFold 3 will write its outputs in a directory called `My_first_fold_TEST`
(the case is respected). If such directory already exists, AlphaFold 3 will
append a timestamp to the directory name to avoid overwriting existing data
unless `--force_output_dir` is passed.
The following structure is used within the output directory: