Augustin Zidek 6b50e384d3 Add the glycan modeling paper in the list of community tools ...

Adapted from https://github.com/google-deepmind/alphafold3/pull/608/changes, thanks @chinchc.

PiperOrigin-RevId: 862720014
Change-Id: I021eef0b46158e8ce28e97d9172ba6e79ef3f30c

2026-01-29 07:03:17 -08:00

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community_tools.md

Add the glycan modeling paper in the list of community tools

2026-01-29 07:03:17 -08:00

contributing.md

Initial release of AlphaFold 3

2024-11-11 10:42:47 +00:00

header.jpg

Initial release of AlphaFold 3

2024-11-11 10:42:47 +00:00

input.md

Add support for protein/DNA/RNA/ligand descriptions

2025-09-02 04:11:53 -07:00

installation.md

Expand documentation around running run_alphafold.py

2024-12-10 15:45:44 +00:00

known_issues.md

Add XLA flag workaround for CUDA Capability 7.x GPUs

2024-12-13 06:35:21 +00:00

metadata_antibody_antigen.csv

Add antibody-antigen metadata from AlphaFold 3 paper

2025-01-20 17:21:34 +00:00

metadata_antibody_antigen.md

Antibody-antigen docs: mention that we always used the first bioassembly

2025-01-20 17:36:41 +00:00

model_parameters.md

Add a documentation on model parameters

2026-01-16 04:04:09 -08:00

output.md

Update the output documentation with case sensitivity and force_output_dir

2025-07-31 09:40:19 -07:00

performance.md

Add option to run Jackhmmer/Nhmmer genetic search in sharded mode (10-30x faster)

2025-10-29 07:55:10 -07:00