remove rf3 config which tagegd along

models/rf3/configs/experiment/rf3_run11-with-confidence.yaml

@@ -1,56 +0,0 @@
-# @package _global_
-
-name: rf3-with-confidence
-project: rf3
-
-tags:
-  # list of tags to add to the run ( & on wandb to easily find & filter runs)
-  - full
-
-defaults:
-  - override /datasets: pdb_only
-  - override /model: rf3_with_confidence
-  - override /trainer: rf3_with_confidence
-
-ckpt_config:
-  _target_: foundry.utils.weights.CheckpointConfig
-  path: null
-  reset_optimizer: true
-
-model:
-  lr_scheduler:
-    base_lr: 0.9e-3 # 1/2 of original learning rate (1.8e-3)
-
-# load confidence features
-# remove within_20_closest_chains from loaders
-datasets:
-  run_confidence_head: true
-  train:
-    pdb:
-      sub_datasets:
-          pn_unit:
-            dataset:
-              dataset:
-                filters:
-                  # filters common across all PDB datasets
-                  - "deposition_date < '2024-01-01'"
-                  - "resolution < 9.0"
-                  - "num_polymer_pn_units <= 300"
-                  - "cluster.notnull()"
-                  - "pdb_id not in ${resolve_import:atomworks.constants,PDB_IDS_WITH_UNPHYSICAL_BONDS}"
-                  # pn_unit specific filters
-                  - "~(q_pn_unit_non_polymer_res_names.notnull() and q_pn_unit_non_polymer_res_names.str.contains('${resolve_import:atomworks.constants,AF3_EXCLUDED_LIGANDS_REGEX}', regex=True))"
-          interface:
-            dataset:
-              dataset:
-                filters:
-                  # filters common across all PDB datasets
-                  - "deposition_date < '2024-01-01'"
-                  - "resolution < 9.0"
-                  - "num_polymer_pn_units <= 300"
-                  - "cluster.notnull()"
-                  - "pdb_id not in ${resolve_import:atomworks.constants,PDB_IDS_WITH_UNPHYSICAL_BONDS}"
-                  # interface specific filters
-                  - "~(pn_unit_1_non_polymer_res_names.notnull() and pn_unit_1_non_polymer_res_names.str.contains('${resolve_import:atomworks.constants,AF3_EXCLUDED_LIGANDS_REGEX}', regex=True))"
-                  - "~(pn_unit_2_non_polymer_res_names.notnull() and pn_unit_2_non_polymer_res_names.str.contains('${resolve_import:atomworks.constants,AF3_EXCLUDED_LIGANDS_REGEX}', regex=True))"
-                  - "is_inter_molecule"